Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01993 ATGTCAAAAGATTCCGAGGAGATAAAGACGGTTGAGCAGTGGAGATGGTCCGAAATGCAAGGCCTTGAGCTGGTGTCTGATGCTCCTCCTCTTTCCGAGCCATATAAAACCAACCCTTCAACGCCACCAGCGGAAGACACAGGCTCGAAGGCTGAGGACCTTGCTCAAGAAGGTGCGACCAAACAAGAACCAAGAGAAATGAACAGCTCTGAAACCAAGCAAGATGGCAGTGCCGGTGGTGGTGGTGCCCCTAATGGCACTAGCGGTAGCGGGGAGAAGCCTGAGACTGTTGCCCCTGTTGGCTTCGGCGAGCTTTTCAGATTTGCTGATAGTTTGGATTACATTCTCATGGCAATTGGAACTGCCGGCGCAATTGTACATGGCTGTTCTTTGCCACTGTTTCTTCGGTTCTTCGCTGATCTTGTAAATTCTTTTGGGTCGAATGCCAATAATTTGGACAAGATGACACAGGAAGTTGTCAAGTTCGCATTTTACTTCCTGGTGGTGGGTGCTGCTATATGGGCATCCTCATGGGCTGAAATTTCCTGCTGGATGTGGACAGGGGAGCGGCAATCGACGAAGATGAGGATCAAGTACCTTGAAGCTGCTTTGAACCAGGACATCCAATACTTTGACACCGAGGTTCGCACATCCGATGTTGTTTTTGCCATTAACACCGATGCTGTCATGGTCCAAGACGCCATTAGCGAGAAGctCGGTAATTTTATTCACTACATGGCAACATTTGTTTCTGGATTCGTCGTGGGTTTCACTGCTGTCTGGCAATTAGCTCTAGTTACTCTCGCTGTAGTCCCTATGATAGCTGTAATAGGAGCCATTCACACAACCACTTTGGCCAAGCTCTCCGGCAAAAGCCAGGAAGCTCTTTCTCAAGCTGGGAACATTGTGGAACAGACAGTTGTGCAAATTCGAGTGGTAATGGCTTTCGTAGGTGACTCCAGAGCACTGCAAGCCTACTCATCAGCCTTGAAGGTGGCCCAGAAGCTTGGCTACAAAAGTGGGTTCGCAAAGGGAATGGGATTGGGCGCGACCTATTTTGTCGTTTTCTGCTGTTATGCGCTTCTGCTATGGTACGGTGGTTACCTGGTTAGGCACCACTATACTAATGGAGGACTTGCCATTGCCACCATGTTTGCTGTTATGATTGGTGGACTGGGTTTAGGGCAATCTGCGCCAAGCATGGCTGCATTTACAAAGGCCAGAGTTGCAGCTGCGAAAATTTTCCGCATAATTGATCACAAGCCAAGTGTAGATCGAAACAGCGAATCAGGGTTGGaattagattcaataacaGGGCTAGTGGAGCTGACAAATGTAGACTTTGCCTACCCATCAAGACCAGATGTTCGCGTCCTCAATAACTTTTCCTTAAATGTGCCTGCTGGCAAGACCATTGCTTTGGTCGGCAGCAGTGGCTCCGGCAAGAGCACCGTTGTCTCTCTCATCGAGAGATTCTACGATCCAACTTCAGGACAAGTTCTGTTAGATGGGCACGACATTAAAACGTTAAAGCTTAAATGGCTGAGGCAGCAAATAGGTCTAGTGAGCCAAGAGCCTGCTTTGTTTGCTACAACAATCAGAGAAAATATACTCTTGGGTAGGCCTGATGCGGACCAAGTTGAGATTGAAGAAGCTGCTAGAGTGGCTAATGCACATTCGTTCATTATCAAGCTTCCTGAAGGTTATGAAACCCAGGTGGGAGAGAGAGGGCTGCAACTTTCAGGAGGACAGAAGCAGAGGATAGCAATTGCAAGGGCTATGCTGAAAAACCCAGCAATCCTTCTCCTTGATGAAGCAACAAGTGCATTAGACTCTGAGTCAGAAAAGCTGGTGCAAGAAGCCCTTGACCGGTTCATGATTGGGAGAACTACTCTTGTAATTGCTCATCGCCTCTCGACTATTCGCAAAGCTGATCTTGTAGCTGTACTCCAGCAAGGCAGTGTTTCTGAACTTGGAACTCATGACGAGCTCAATGCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATCCGAATGCAGGAGATGGCACATGAAACTGCTCTGAATAATGCCAGAAAGAGTAGTGCAAGGCCATCAAGTGCCAGAAACTCTGTGAGCTCACCAATAATTGCTAGAAATTCTTCATATGGGCGGTCGCCGTACTCACGCAGGCTGTCTGACTTCTCTACTTCAGATTTTAGTCTGTCCCTTGATGCAAGCCATCCTAATTACAGGATGGAAAAGCTTGCCTTTAAAGATCAAGCCAGTTCCTTCTGGCGCCTTGCAAAAATGAACTCTCCTGAATGGCTTTATGCATTAATTGGTTCCATAGGATCTGTTATTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTCAGTGCTGTTATGAGCGTCTACTACAATCCTGACCACAGATACATGATCCGACAAATAGAAAAGTACTGCTACTTGTTGATTGGGCTTTCATCAGCTGCACTTCTCTTCAATACACTGCAGCACTTCTTCTGGGATATTGTGGGAGAAAATCTTACTAAGAGAGTGAGGGAGAAAATGCTGACTGCTGtgctaaaaaatgaaatggcaTGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCTGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCTATCGGTGATCGGATTTCAGTAATTGTGCAGAACACTGCACTGATGCTTGTTGCTTGCACTGCAGGGTTTGTTTTGCAGTGGCGCCTTGCCCTTGTCCTCGTAGCTGTCTTCCCTGTTGTCGTTGCAGCAACTGTTTTACAGAAAATGTTCATGACTGGCTTCTCTGGAGACTTAGAAGCGGCTCATGCAAAAGCCACTCAACTAGCAGGGGAGGCTATAGCCAATGTAAGAACCGTTGCAGCCTTCAACTCAGAAACCAAGATTGTTGGTCTTTTCACGTCCAATCTGGAAACCCCACTACGGCGTTGCTTTTGGAAGGGACAGATTTCTGGAAGTGGATTTGGAATAGCCCAGTTTGCACTTTACGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGAATATCTGATTTCTCAAAAACCATCAGAGTTTTTATGGTGCTTATGGTCTCTGCCAATGGTGCTGCTGAAACTCTAACACTGGCTCCTGACTTCATCAAGGGAGGTCGAGCCATGAGGTCTGTATTCGATCTCCTTGACCGAAGAACTGAAATTGAGCCTGATGACCCAGATGCCACCCCAGTTCCTGATCGTCTGCGTGGAGAAGTTGAACTCAAGCATGTAGATTTCTCATATCCTACTCGTCCAGACATGCCAGTTTTTCGTGACCTTAGTCTTCGCGTCAGAGCCGGCAAAACTCTTGCCCTTGTTGGGCCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTTATACAGAGATTTTATGATCCAACCTCTGGGAGGGTTATGATTGATGGAAAGGACATTAGAAAATACAACCTCAAATCCCTCAGAAAGCACATTGCCATTGTACCTCAGGAACCTTCCCTCTTTGCTGCCACTATCTATGAAAACATCGCTTATGGGCATGAGTCAGCAACTGAAGCTGAGATAGTTGAAGCAGCAACTCTTGCCAATGCCCACAAGTTCATTTCTGGTTTGCCAGATGGGTACAAAACATTTGTTGGGGAGAGAGGAGTTCAACTTTCTGGAGGACAAAAGCAGAGAATAGCCATTGCTAGAGCCTTTGTGAGAAAGGCAGAGCTTATGCTTCTTGATGAAGCAACAAGTGCACTTGATGCTGAGTCTGAGAGATCTGTTCAGGAGGCTCTAGACCGTGCCTGCTCGGGAAAAACAACCATTATTGTTGCTCACAGACTCTCAACTATTAGGAATGCCAATCTCATTGCTGTGATTGATGATGGGAAAGTGGCAGAGCAAGGATCCCACTCACAGCTATTGAAAAATCACCCTGATGGGATCTATGCACGAATGATTCAATTACAAAGGTTCACAAACACCCAAGTTATTGGAATGGCCTCAGGTTCAACTTCTTCAGCAAGACCAAAAGATGGTGATGAAAAAGAAGGCTA 4091 0.4627 MSKDSEEIKTVEQWRWSEMQGLELVSDAPPLSEPYKTNPSTPPAEDTGSKAEDLAQEGATKQEPREMNSSETKQDGSAGGGGAPNGTSGSGEKPETVAPVGFGELFRFADSLDYILMAIGTAGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKFAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSGKSQEALSQAGNIVEQTVVQIRVVMAFVGDSRALQAYSSALKVAQKLGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPSVDRNSESGLELDSITGLVELTNVDFAYPSRPDVRVLNNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSELGTHDELNAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRMEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVICGSLSAFFAYVLSAVMSVYYNPDHRYMIRQIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRVRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRKHIAIVPQEPSLFAATIYENIAYGHESATEAEIVEAATLANAHKFISGLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTNTQVIGMASGSTSSARPKDGDEKEG 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01993 1363 SUPERFAMILY ABC transporter transmembrane region 105 425 IPR036640 GO:0005524|GO:0016021
Bva13g01993 1363 MobiDBLite consensus disorder prediction 71 92 - -
Bva13g01993 1363 Pfam ABC transporter transmembrane region 774 1043 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g01993 1363 Pfam ABC transporter transmembrane region 118 390 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g01993 1363 MobiDBLite consensus disorder prediction 50 70 - -
Bva13g01993 1363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 680 IPR027417 -
Bva13g01993 1363 Pfam ABC transporter 459 608 IPR003439 GO:0005524
Bva13g01993 1363 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 117 1339 IPR039421 -
Bva13g01993 1363 ProSitePatterns ABC transporters family signature. 580 594 IPR017871 GO:0005524
Bva13g01993 1363 SUPERFAMILY ABC transporter transmembrane region 760 1083 IPR036640 GO:0005524|GO:0016021
Bva13g01993 1363 SMART AAA_5 468 654 IPR003593 -
Bva13g01993 1363 SMART AAA_5 1123 1315 IPR003593 -
Bva13g01993 1363 CDD ABC_6TM_Pgp_ABCB1_D1_like 117 414 - -
Bva13g01993 1363 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1096 1332 IPR003439 GO:0005524
Bva13g01993 1363 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 117 1339 - -
Bva13g01993 1363 Pfam ABC transporter 1115 1263 IPR003439 GO:0005524
Bva13g01993 1363 ProSitePatterns ABC transporters family signature. 1235 1249 IPR017871 GO:0005524
Bva13g01993 1363 Gene3D - 439 704 IPR027417 -
Bva13g01993 1363 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 441 677 IPR003439 GO:0005524
Bva13g01993 1363 CDD ABC_MTABC3_MDL1_MDL2 1096 1335 - -
Bva13g01993 1363 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 118 406 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g01993 1363 CDD ABC_6TM_Pgp_ABCB1_D2_like 762 1078 - -
Bva13g01993 1363 CDD ABC_MTABC3_MDL1_MDL2 441 680 - -
Bva13g01993 1363 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 773 1060 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g01993 1363 Gene3D - 1087 1342 IPR027417 -
Bva13g01993 1363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1087 1335 IPR027417 -
Bva13g01993 1363 MobiDBLite consensus disorder prediction 21 96 - -
Bva13g01993 1363 Gene3D ABC transporter type 1, transmembrane domain 164 1069 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01993 Bva-Chr13 15994131 16000303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01993 80 1357 Calmodulin-binding Proteins AT2G36910 88.368 0.0 2320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01993 K05658 - jre:109021322 2346.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01993 13 15994131 16000303 Bva13g01993 13 15994131 16000303 ECH