Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01983 ATGTTTATTAGGTCATTTGTTGACAAGATTCAAAAGCGTCTCGTCTCACACTTTGCACCCAGATCAAGACCTATATTCAACTACTTCAATGAAGATAGTGTCAAAGCAGCAGCAGTGAATATTCCAGATGATGTTACTGAAGGACACTTTGCCGTGCTTGCAATAAAGGGTGAGGAAACCAAAAGGTTCGTTGTTGAATTAGATTACTTGAACAACCCTGCGTTCTTGGGATTGCTTGAGCTGGCTGAGCAAGAATATGGGTTCAGACAGAAGGGAGCTCTTGCTGTTCCTTGCCGGCCTCATGAATTTCAGAAGATTCTAGACGAGTGGAGAAacagttttaatta 347 0.4121 MFIRSFVDKIQKRLVSHFAPRSRPIFNYFNEDSVKAAAVNIPDDVTEGHFAVLAIKGEETKRFVVELDYLNNPAFLGLLELAEQEYGFRQKGALAVPCRPHEFQKILDEWRNSFN 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01983 115 Pfam Auxin responsive protein 39 107 IPR003676 GO:0009733
Bva13g01983 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 111 IPR003676 GO:0009733
Bva13g01983 115 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01983 Bva-Chr13 15925878 15926225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01983 42 114 Calmodulin-binding Proteins AT5G20810 41.096 4.16e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01983 - K14488 gmx:106795483 135.191