Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01980 ATGAGGTCTTTTGTTGGGAAGATACAAAAGGGTCTGTCAGTGTTTGCACCTAGAACAAAACGTGCACTTAGCTATCAACTtgaagcagcagcagcagtgGCGGCGACAATAGAAGTGGTACCAGATGATGTTACTGAAGGGCATTTTGCTGTTCTTGCAATAAAGGGTGAGGAAATCAAAAggtttattattgaattagaCTACTTGAACGACCCTGCATTCTTGGGTTTGCTGGACATGGCTGAGGAAGAGTATGGCTTCAGACAGAAGGGAGCTCTTGCTGTCCCCTGCCGGCCTCAAGAAGTACAGAGGATTCTGGATGAACGCAAGGTTGAATACCAATATTA 347 0.4063 MRSFVGKIQKGLSVFAPRTKRALSYQLEAAAAVAATIEVVPDDVTEGHFAVLAIKGEEIKRFIIELDYLNDPAFLGLLDMAEEEYGFRQKGALAVPCRPQEVQRILDERKVEYQY 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01980 115 Pfam Auxin responsive protein 35 106 IPR003676 GO:0009733
Bva13g01980 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 110 IPR003676 GO:0009733
Bva13g01980 115 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01980 Bva-Chr13 15918028 15918375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01980 41 97 Calmodulin-binding Proteins AT5G20810 50.877 3.52e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01980 - K14488 gmx:100818734 142.51