Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01974 ATGAGTTCAGAAGTAGCCCTACAAGCAGATTCGAAATCTAGGTCAGTGACACCCACCGCCACTACTACCAACAAGCTCACTCCACTATCTTCCTCCCGCTCCACCAAAGACCGTCACACTAAAGTGAACGGCCGGGGCAGACGTGTCCGCATGCCACCGCTATGCGCTGCCCGAATTTTCCAACTGACCCGCGAACTTGGCCACCGCTCTGACGGTGAGACCATAGAGTGGCTGCTACGCCAAGCCGAGGCCTCTATCATCGCTGCCACCGGAAGTGGAACAGTCCCTTCGGCCCCAGTATCCACCGCTGCTGCTATCTCCTCCTCAGCAGCCTCTGTTACTTGCCAGGTCCAACCCGTTTCAGCGGTTAGCAATGGGCAGGGGATGTTTGCTATGGCTCTGCCGCAGCCGTTGCCGAGTTGTCGTTTAGATTTGTGTCAGCCATCGGGTATGGATTACGCTGCCGCAGCAGCAGCGGCCAATGGGTACCGACATATGCCATTCACCGCCTTGTTGTTACAGACAGGGACGACAGAGGAAGCGGAAGATACGCAGCAAGAGGAGAGTCTGAGGGAGCAATA 581 0.5663 MSSEVALQADSKSRSVTPTATTTNKLTPLSSSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEASIIAATGSGTVPSAPVSTAAAISSSAASVTCQVQPVSAVSNGQGMFAMALPQPLPSCRLDLCQPSGMDYAAAAAAANGYRHMPFTALLLQTGTTEEAEDTQQEESLREQ 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01974 193 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 17 119 - -
Bva13g01974 193 ProSiteProfiles TCP domain profile. 35 89 IPR017887 -
Bva13g01974 193 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 119 IPR005333 GO:0003700
Bva13g01974 193 MobiDBLite consensus disorder prediction 1 31 - -
Bva13g01974 193 Pfam TCP family transcription factor 34 133 IPR017887 -
Bva13g01974 193 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01974 Bva-Chr13 15882882 15883814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01974 35 178 TCP Transcription Factor Family AT2G37000 56.250 7.73e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva13g01974 TCP 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01974 - - jre:108990895 238.039