Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01972 ATGACTAATTTATCTGCGATCGGGCTATCTACTGATACTGCAGTCCAATCATTTGCAATGAAGTGTTTTCCATTTCACTatggagagaagaaagaagaaccGAAAAGCTTGCAGTCAATTTCGGTTCGGTCAAACAGTTCTACATATCTTGAGGGTGATATAAAAAGATCTGGTTctgaattaaattctcaaaatgCCTCAGACAACAGCACAGATTCCCTTAGGAGGTCTGCATTTCCCAGTTTGTCTCAAAGACCTAGCAACCTTAGAGTTTTTACAGTATCTGAATTGAAATCAGCCACAAAAAACTTCAGTCGCTCTGTTATGCTCGGAGAGGGTGGGTTTGGATGTGTTTACAAAGGATTGATCAAGAGTGCAGAGGAACCATCCAGAAGACTTGAAGTTGCAGTAAAACAACTTGGTAAAAGAGGAATTCAGGGTCATAAGGAATGGGTAACGGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTCGTAAAACTAGTGGGGTATTGTGcggatgatgatgaaagaggAATCCAGCGGCTtcttatttatgaatatatgcCGAACATGAGTGTGGAACACCATTTGTCCCACCGAGCAGAGActcctcttccttggtccagGAGATTGAAAGTAGCCCAAGATGCAGCTCGTGGATTAACATACCTCCATGAGGAAATGGAATTTCAGATAATCTTCAGAGACTTCAAATCTTCTAACATTCTTCTGGATGAGGAGTGGAATGCAAAGCTATCAGACTTTGGGTTGGCAAGATTGGGTCCTCCTGACGGATTAACTCATGTCTCGACAGCGGTTGTAGGAACAATGGGGTATGCTGCTCCTGAATATATTCAAACAGGACGTCTCACGGCAAAGAGTGATGTATGGGGCTATGGCGTCTTCCTCTATGAACTCATCACTGGTAGGCGCCCTTTAGACCGGAATCGTCCCAAGGGTGAGCAGAAGCTCTTGGAGTGGATCAGGCCATACCTATCAGATGGGAGGAAATTTCAACTAATTCTGGATCCAAGGCTTGACAGGAAACACATTGTCAGGTCAGCTCAAAAACTTGCTGTTATAGCTAACCGATGCTTGGTCAAAAACCCCAAAAGTCGCCCAAAAATGAGTGAGGTCCTGGAAATGGTTAATCGGATTGTAGAATCTTCATCAACTGGAAGTCCTCAGCTACCCTTGAAAAATTTGGCATCAGCTGAAGCTTCTGAGGATTCTGAATTTGTCAAACTGTTTGAGGAGATTTCCAGTGATGCTGCGGAAGAAGGTAAGAGGAATTTGTGTAGTTCAGGAGACATCAGAATTTCTGTGGATTTGCAAAATCTGTATGGGCAAATATGGCTGATACAGCTGCTTGTTCTTCTGAAGccctttgttttttcttcctcaTCTGAACGCAGCCTTGATGATTTCCGGATTGGCTTGGCACTGAATCAAACTCTTTTGGGCAGATCTATTCTTGCTTACAACATTTTCTGGGAGAAGACTTA 1511 0.4004 MTNLSAIGLSTDTAVQSFAMKCFPFHYGEKKEEPKSLQSISVRSNSSTYLEGDIKRSGSELNSQNASDNSTDSLRRSAFPSLSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYKGLIKSAEEPSRRLEVAVKQLGKRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNMSVEHHLSHRAETPLPWSRRLKVAQDAARGLTYLHEEMEFQIIFRDFKSSNILLDEEWNAKLSDFGLARLGPPDGLTHVSTAVVGTMGYAAPEYIQTGRLTAKSDVWGYGVFLYELITGRRPLDRNRPKGEQKLLEWIRPYLSDGRKFQLILDPRLDRKHIVRSAQKLAVIANRCLVKNPKSRPKMSEVLEMVNRIVESSSTGSPQLPLKNLASAEASEDSEFVKLFEEISSDAAEEGKRNLCSSGDIRISVDLQNLYGQIWLIQLLVLLKPFVFSSSSERSLDDFRIGLALNQTLLGRSILAYNIFWEKT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01972 503 PANTHER OS01G0588500 PROTEIN-RELATED 24 415 - -
Bva13g01972 503 Gene3D Phosphorylase Kinase; domain 1 84 189 - -
Bva13g01972 503 MobiDBLite consensus disorder prediction 57 79 - -
Bva13g01972 503 Gene3D Transferase(Phosphotransferase) domain 1 190 401 - -
Bva13g01972 503 PANTHER KINASE 1B 24 415 - -
Bva13g01972 503 CDD STKc_IRAK 110 388 - -
Bva13g01972 503 SUPERFAMILY Protein kinase-like (PK-like) 80 385 IPR011009 -
Bva13g01972 503 ProSiteProfiles Protein kinase domain profile. 104 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01972 503 ProSitePatterns Protein kinases ATP-binding region signature. 110 138 IPR017441 GO:0005524
Bva13g01972 503 Pfam Protein kinase domain 106 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01972 Bva-Chr13 15870802 15879489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01972 20 400 Glycoside Hydrolase AT3G07070 40.409 1.24e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva13g01972 Pkinase 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01972 - - gmx:100305438 689.493