Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01971 ATGAATCGAAAGAGGTGTAATGCCTCCTGGATTAccctttttataatttacttaaGTCTGCTACCACGCATTGGATGTGACGATGAGGAAGATTATGGTGAACCGGGTGACACAAATTCACTCCCAGTTGTGACGGAACTCATCTATTCCCGTCTCACGAATGTTACCACTGATCTAACTATGGACATGAAGCAAAGTCTGAGCTTCTGTATAAAGGATGCGGATAACGATTGGAATGAGGCATTTAATTTTACTGGAAAATTGGATTTCTTGGCAAATTGTATTAGGAAGATGAAAGGAGATCTCACTAATCGAATATGTACAGCGGCTGAAATAAAATTCTACTTCAACAGTTTCTTTGATCATGCGGGATCAGCAACCGGTTACTTAAAACCTAATAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGCGAACCTGGTTGGGGTTGTAGTGTTAGTTTAGGCAAGAACCAGAAAGTTGACCTTAATGCAGCAGAGACTCCTATTAGAACAAACGACTGTCAACCTTGTTGCGAGGGGTTTTTCTGCCCTCAAGGAATGACTTGTATGATACCTTGTCCACTAGGTTCTTACTGTCCACTAGCGACACTGAACGAAACAACTGGAATGTGTGACCCATATAGCTACCAGATACCTCCTGGAGAAACAAATCATAGTTGTGGTAGTGCTGATATATGGACTGGTGTTAACAATAACAGTGATATCTTCTGTTCTCCAGGATCATACTGTCCATCTCCAATACGCAAAGTTTCTTGCAGTAGTGGGCATTACTGCAGGACGGGTAGCACAAATCAATTGCGATGCTTTAAGTTGAGTACCTGTAATCCTAACACATCAAGCCAAAGTATGCATGCTTACGGGGTTTTGCTGATcATTGCATTGAGTACCGTCATGCTGATCATTTACAATTGTTCTGATCAAGTTCTCTCTACTCGAGAAAGAAGGCAGGCTAAATCCAGGGAAGCTGCAGCTAAGCATGCAAGAGAAACTTTACAAGCTCGTGAAAGGtggaaaatggcaaaaaatgCTGCTAAGAAGCGTGGTGGTCTTCAAGCTCAGCTCTCCCGTACGTTTTCTCGTAGAAAATCTCTAAAGCAAGATGGGCCATTGAAAACAGGTGATTCTGCATCGGCGCGCATGCCTACAGATTCTTCAAGCACATCTGAGCAGTCATCTACAGCTTCAAAacccaagaaaaaggaagctGGCAACCTCACTAAAATGTTGAATTCCATTGAGAATGACCCACATAGCCCTGAAGGATTCAATCTGCAGATTggagacaaaaatattaaaaagcaGATGCCAAAGGGAAAACAGTTGCATACTCATagccaaattttcaaatatgcaTATGGTCAAATTGAGAAGGAGAAAGCTATGCAAGACGCAAACAAGAACTTGACTTTCTCGGGAGTAATTTCAATGGCTACTGATAGTGAGATTAGGACAAGGCCTCCGATTGAGGTAGCTTTCAAAGATCTAACTCTCACTTTGAAAGGGAAAAACAAACATATAATGAAGTCTGTGACTGGCAAACTCATGCCAGGTCGAGTTTCAGCTGTCATGGGTCCCTCGGGAGCTGGAAAAACTACATTTCTTTCTGCTTTGTTAGGGAAAGCAAGAGGATGCCATGTGACAGGCTCAATTTTGATAAATGGAAAACATGAATCAATACACTCatataagaaaattgttgGTTTTGTGCCACAAGATGATATAGTTCATGGGGACTTGACGGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATGTGCGGACATGCCAAAAGCAGATAAGGTTCTGATTATTGAAAGAGTAATCGAGTCTTTGGGACTCCAACCAGTGAGAGATTCCCTAGTTGGGACAGTAGAGAGGCGAGGCATTTCAGGGGGGCAAAAGAAACGTGTAAATGTAGGACTAGAGATGGTGATGGAGCCTTCATTGTTGATTCTAGATGAGCCTACAACTGGTCTAGACAGTGCATCTTCCAGTTTACTGCTAAAAGCACTTCGACGTGAAGCTCTTGAAGGGGTAAACATCTGCATGGTACTTCACCAACCAAGCTACACATTGTTCAGAATGTTCGATGATATAATCTTTTTAGCTAAAGGTGGTCTTGTTGCATATCTTGGACCTGTCAAAAAAGTAGAAGAATACTTCGCTGGAATTGGAATCACCGTACCAGACCGCATAAATCCTCCAGACCACTTCATTGACATTCTGGAGGGTTTAGTGAAACCAACTACAGGTGTGACACATGAGCAGCTTCCCGTCAGATGGATGCTTCATAATGGCTACCCAATACCACCAGATATGCTTCATTTTGCTGATGAAATTGCCGCATCTTCATCTGCTGCTCCTGCTCCTACATTAAGTGATGCAGAGAAGGGTACCAACGAAGTTGTTGAACAATCCTTTGCTGTAGAATTGTGGGAGGATATGAAGAGTAATGTTCAGATGCATCGAGATCATTTAGAGGCAACCTTCTTAAGGTCTAAGGACTTATCCAACCGACGAACTCCTGGTGTACTTCGCCAATACAGATACTTCCTTGGGAGGGTTATTAAGCAGCGGTTAAGAGAAGCAAGAATGCAAGCAGTTGAATATCTGATTTTATTACTTGCTGGTGCTATCCTTGGAACTCTTTCCGAAATGAATGATGAAACATTTGGGGCCCTTGGCTATACTTATGCTGTCATTGCTGTCTctCTACTATGCAAGATAGCAGCTCTGAGATCATTTTCTCTGGATAAATTACAATACTGGAGAGAGAGTTCATCTGGAATCAGCACCCTGGCTCATTTTCTGGCCAAAGACACAGTAGATCATTTCAATACGCTCGTCAAGCCTGTGGTTTTTCTGTCCATGTTCTACTTTTTTAGCAATCCAAGGTCAAGCTTTGGAAGTAATTACATGGTTTTGGTTTGCCTGGTGTACTGTGTGACTGGCATCGCTTATGTACTAGCCATTTACTTTCAACCTGCTCCAGCACAGCTGTGGTCAGTGCTTGCTCCTGTTGTAATGACTCTCAtctcaaaacaagaaagagataCTGCACTTGTGAGGACCATACAAAAACTGTGTTACCCAAAATGGGCTTTGGAGGCCTTTGTCATTGCAAATGCTGAAAGGTATTCTGGGGTGTGGCTGATAACTCGGTGTGGTTCACTGATGAAGAATGGCTATGACCTCCACGAGTGGTCTCTTTGTCTTGTTATCATCGTTTTATATGGTATACTTGCCCGTGCTATAGCCTACGGTTGTATGCTGCTCTCCCAGAAGAAGTG 3320 0.4127 MNRKRCNASWITLFIIYLSLLPRIGCDDEEDYGEPGDTNSLPVVTELIYSRLTNVTTDLTMDMKQSLSFCIKDADNDWNEAFNFTGKLDFLANCIRKMKGDLTNRICTAAEIKFYFNSFFDHAGSATGYLKPNKNCNLTSWVSGCEPGWGCSVSLGKNQKVDLNAAETPIRTNDCQPCCEGFFCPQGMTCMIPCPLGSYCPLATLNETTGMCDPYSYQIPPGETNHSCGSADIWTGVNNNSDIFCSPGSYCPSPIRKVSCSSGHYCRTGSTNQLRCFKLSTCNPNTSSQSMHAYGVLLIIALSTVMLIIYNCSDQVLSTRERRQAKSREAAAKHARETLQARERWKMAKNAAKKRGGLQAQLSRTFSRRKSLKQDGPLKTGDSASARMPTDSSSTSEQSSTASKPKKKEAGNLTKMLNSIENDPHSPEGFNLQIGDKNIKKQMPKGKQLHTHSQIFKYAYGQIEKEKAMQDANKNLTFSGVISMATDSEIRTRPPIEVAFKDLTLTLKGKNKHIMKSVTGKLMPGRVSAVMGPSGAGKTTFLSALLGKARGCHVTGSILINGKHESIHSYKKIVGFVPQDDIVHGDLTVEENLRFSARCRLCADMPKADKVLIIERVIESLGLQPVRDSLVGTVERRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLVAYLGPVKKVEEYFAGIGITVPDRINPPDHFIDILEGLVKPTTGVTHEQLPVRWMLHNGYPIPPDMLHFADEIAASSSAAPAPTLSDAEKGTNEVVEQSFAVELWEDMKSNVQMHRDHLEATFLRSKDLSNRRTPGVLRQYRYFLGRVIKQRLREARMQAVEYLILLLAGAILGTLSEMNDETFGALGYTYAVIAVSLLCKIAALRSFSLDKLQYWRESSSGISTLAHFLAKDTVDHFNTLVKPVVFLSMFYFFSNPRSSFGSNYMVLVCLVYCVTGIAYVLAIYFQPAPAQLWSVLAPVVMTLISKQERDTALVRTIQKLCYPKWALEAFVIANAERYSGVWLITRCGSLMKNGYDLHEWSLCLVIIVLYGILARAIAYGCMLLSQKK 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01971 1106 ProSitePatterns ABC transporters family signature. 639 653 IPR017871 GO:0005524
Bva13g01971 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 720 IPR027417 -
Bva13g01971 1106 SMART AAA_5 524 716 IPR003593 -
Bva13g01971 1106 Pfam ABC-2 type transporter 696 1106 IPR043926 GO:0140359
Bva13g01971 1106 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 37 1102 - -
Bva13g01971 1106 CDD ABCG_EPDR 495 722 - -
Bva13g01971 1106 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 498 739 IPR003439 GO:0005524
Bva13g01971 1106 MobiDBLite consensus disorder prediction 349 411 - -
Bva13g01971 1106 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 1102 - -
Bva13g01971 1106 MobiDBLite consensus disorder prediction 385 401 - -
Bva13g01971 1106 Pfam ABC transporter 516 666 IPR003439 GO:0005524
Bva13g01971 1106 Gene3D - 488 734 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01971 Bva-Chr13 15863776 15870640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01971 525 717 Calmodulin-binding Proteins AT2G36910 29.353 7.60e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01971 - - gmx:100780238 1640.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01971 13 15863776 15870640 Bva03g01151 03 11125339 11135057 ECH
Bva13g01971 13 15863776 15870640 Bva09g00274 09 1426632 1432502 ECH
Bva13g01971 13 15863776 15870640 Bva13g01971 13 15863776 15870640 ECH