Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01948 ATGCAAATCCTCTGTAGCTTTCCGGGGTTTTCTCCATCTCTACTCGCTTTTCAGCTTCTTCTGATCCTTTGCTTTACTGGCGCATATGGGTTTGGGACGATGGGACCAATATCTGCATCGTTCGGCAAGGACGAGTTTTTCTGTGCCATCGATGCCAGTGGGAAGCAGGACGTTATCTGCTGGGGGAAGAACAGCTCTCTACCAGTTCCGCCGTCTCCTTCATCTTCAGCCTATTTCAGCAATATCCCTGCCATGGCAGCTCTCTCTGGTGGCGAGGGATTCATGTGTGGCATTCTAGCAAACACTTCGCAAGCATACTGCTGGAGCCCCACCAATTCAGGCATGGATCTCGTGCCTCCTATCTACCAAAACACTTCTTATTCTCATATGGCTGCGGGGAAGAATCATGTTTGTGCTATTAGAGGGTATTATTATGCTGATCACGATTCCGGAACTGTTGATTGTTGGGAGATTGTGACAAGTAAGAACCATAGTTTCGCTTCCGAGCAAAGCGGTTTATATTCTGATCAGTCCAGTAATAATCTTGAATTGGACAAGATTGTATCCGGTGAGGGATTTACTTGTGGTGTGGTCAGAGAAGGAGGACTCGTTTGTTGGGGACCCACTTCGACGAGTTTAGGGGTCTCGAATGTTTCAGAAAACTACGCAGTTTTAGCATCGGGTAGGAGTTctgtttgtgggatttctaatGTTTCTGGTGATTTGAAGTGTTGGGGCGATGCAGATTCATTTGTTGATCCACCCCTTAAGGTTCCGTTGGTCTCTTTGTCAGCTGGGGCGAACCATTTTTGTGGTATTCGAGCTGATAATCATGCAGTCGAGTGTTGGGGGAATTTCAATTCCTCTGTGGTTCCAAAAGGTTCTGGATTTATGGCTATTGCGTCTTCAGATTATACAACCTGCGGTATCAGAGAAGATGATCTTCTTCTTGATTGCTGGTTGGTCAATGCATCCAAACCTGATTTTGATCCTCCACTGGAATTGTCAAGTCCGGGTCTCTGCAGAGTTAGTCCCTGTAACGAAGGGGAATTTGCTTTCAATGTGAGTGTTCTAAATGAACCGGATTTAACAAGCCTCTGCGTTCGAAATGTTTTGAGGATTTGTTCACCTTGTGGGTCAAATTGTTCTCAAGGTTTCTTCTTGTCTAGTCCATGTACTGAGAATGCTGATAGAGCATGCACCGCTTGTTCTCTTTGCCAGAACAGCTCTTGTTGGGATGTTTGTCAACTTCAGTCATCTGCACTCTCGTACCAGAGGCATTGGCATCATTTGCGTAGATTATTGATCATTGTTGGTTCCTCTGCGTTTGGATTCATGCTGATATTAACTTTGGTCTGTCTTCTCCTTCGTTTGTTTATCAACCGAAAGTCCAAGGGGGCTAAGAAACAATCCAAATCTTGCATGGGCAAACCAGAGCAGGAAAATGACATGAATGTTGGTCTTCACTCTTCCCCTTCTACAGCTTCCTGTCCTGGGCTGCCTCAAGTTTTCCGACTCTCAGAGCTGAAAGATGCGACTAATGGCTTCAAGGAATTTAATGAACTCGGTAGGGGAAATTATGGTTTTGTTTACAAAGCTGTATTAACAGATGGAAGGGTGGTTGCGGTCAAGAGGGCAAACGCTGCCACAATAATTCACACTAATAATCGTGACTTCGAAATGGAGCTGGAAATTCTCTGCAAAATCAGACATTGTAATATAGTGAACTTGTTGGGTTACTGTGCAGAGATGGGGGAGAGATTGCTTGTTTATGAGTACATGCCTCATGGAACACTTTATGACCATCTCCACGGTGGGCTTTCTCCTCTTAATTGGAGCCTTAGGCTTAAGATTTCAATGCAAGCTGCAAAGGGCCTCGAATACCTTCACAAGGAACTCATGCCGCCAGTTGTTCATAGGGATGTTAAGAGTTCCAACATTCTTTTGGATTTAGAGTGGGGTGCAAGAATAGCAGACTTTGGACTTGTTACTTCAAGTGAGAAAGATCTCAATGGGGACCTAGCAACTGATGTTTACAACCTTGGGATTGTGTTGCTTGAGATTCTTAGCGGAAGGAAAGCTTATGACAGAGACTTCACGCCTCCGAATATAGTTGAATGGGCACCGCCTTTAATCAAACAGGGGAAGGCAGCTGCCATAATTGACAGGAATATTTCTCTTCCAAGGAATGTTGAGCCTTTGCTTAAGCTTGCTGAAATAGCAGAGCACGCTGTGAAGGAGAATCCAAGTCAACGTCCTTCTATGTCAGATCTAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTGATCTTATA 2318 0.4443 MQILCSFPGFSPSLLAFQLLLILCFTGAYGFGTMGPISASFGKDEFFCAIDASGKQDVICWGKNSSLPVPPSPSSSAYFSNIPAMAALSGGEGFMCGILANTSQAYCWSPTNSGMDLVPPIYQNTSYSHMAAGKNHVCAIRGYYYADHDSGTVDCWEIVTSKNHSFASEQSGLYSDQSSNNLELDKIVSGEGFTCGVVREGGLVCWGPTSTSLGVSNVSENYAVLASGRSSVCGISNVSGDLKCWGDADSFVDPPLKVPLVSLSAGANHFCGIRADNHAVECWGNFNSSVVPKGSGFMAIASSDYTTCGIREDDLLLDCWLVNASKPDFDPPLELSSPGLCRVSPCNEGEFAFNVSVLNEPDLTSLCVRNVLRICSPCGSNCSQGFFLSSPCTENADRACTACSLCQNSSCWDVCQLQSSALSYQRHWHHLRRLLIIVGSSAFGFMLILTLVCLLLRLFINRKSKGAKKQSKSCMGKPEQENDMNVGLHSSPSTASCPGLPQVFRLSELKDATNGFKEFNELGRGNYGFVYKAVLTDGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKELMPPVVHRDVKSSNILLDLEWGARIADFGLVTSSEKDLNGDLATDVYNLGIVLLEILSGRKAYDRDFTPPNIVEWAPPLIKQGKAAAIIDRNISLPRNVEPLLKLAEIAEHAVKENPSQRPSMSDLASWLEQIVKDGLIL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01948 772 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 34 770 - -
Bva13g01948 772 SUPERFAMILY RCC1/BLIP-II 180 328 IPR009091 -
Bva13g01948 772 Gene3D Phosphorylase Kinase; domain 1 481 593 - -
Bva13g01948 772 PANTHER OS01G0750732 PROTEIN 34 770 - -
Bva13g01948 772 Pfam Protein kinase domain 516 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01948 772 SUPERFAMILY Protein kinase-like (PK-like) 491 763 IPR011009 -
Bva13g01948 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Bva13g01948 772 Gene3D Transferase(Phosphotransferase) domain 1 594 769 - -
Bva13g01948 772 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Bva13g01948 772 Gene3D - 28 208 IPR009091 -
Bva13g01948 772 ProSiteProfiles Protein kinase domain profile. 516 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01948 772 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 345 400 IPR001368 GO:0005515
Bva13g01948 772 SUPERFAMILY RCC1/BLIP-II 36 141 IPR009091 -
Bva13g01948 772 Gene3D - 209 326 IPR009091 -
Bva13g01948 772 SMART serkin_6 516 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01948 Bva-Chr13 15725337 15727655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01948 14 764 Receptor kinase-like Gene Family AT3G59420 31.695 1.47e-116 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g01948 Pkinase 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01948 - - qsu:112022775 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01948 13 15725337 15727655 Bva13g01948 13 15725337 15727655 ECH