Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01947 ATGTCATACGTAGAAAGTGTCAAAGTTTCAAGGAGGCACTACTATCCTGTTGCCGTGTCTTCTTCACTGTTCTCTCGGaatgtttctctttctcctgATTTTCTTCCACGttGTTTCTCGCCAGCTGTCATAGAAAAGGGGCAATTGAAGCACGACGACCCAAAGGGAGAGAATGCTGAAACGTTTCGTGTGTTCACTGCTAGCGAATTGAAATCTGCCACTCATGGTTTTCATCATTCGGACAAGCTTGGAGAGGGTGGCTTTGGCTCTGTTTACAAGGGGCGACTTCGGGATGGCACAATGGTAGCTGTAAAAGTACTGTCCATAGAGCTAGAATCGATGCGAGGAGAGAGGGAGTTTGTAGCAGAATTGGCTACCCTCTCACATATCAAACACGAAAATCTGGTCATTCTTCGTGGGTGTTGTGTAGAAGGAAATCACAGATATTTAGTTTACGATTACATGGAGAACAACAGCGTTTACAGCACTTTCCTAAGTTCAGAGCCCAAAAGGGCGAAATTCAGCTGGGAAAGAAGGAGACTCGTATGCATAGattttggcTTGGCAAAGTTACTCAGAGATGAAAACTCATATATCAGCACTCGAGTTGCAGGGACATTAGGGTACCTTGCTCCAGAATATGCTAGTTCTGGACAGGTGACGAGAAAATCAGATGTTTACAGTTTTGGAGTGCTACTCTTGGAAATTGTCAGTGGTCGAGTAGTTGTGGATAATTATCAAGAGACGGAAAGATTCCTAGTGGAGAAGGCGTGGGCAGCATATGAAGCTGATAACCTTTTACGAATGGTGGATCCTGTTCTTAATATGAACTTTGATTCCGAAGAAGCCATAAGATTCCTAAAGGTGGGGCTAAGTTGTGTGCAAGAAACTGCCAAACTTCGGCCAACAATGTCACAAATTGTTGAATTGTTGAGTAATAGGATGAATGTGGAAGATGTTAGTATTTCGAAACCAGGTCTTGTTTCTGATCTCAGGCAAATCAGGATCAGGAAGCAGCAAATCGATTCATCCCAGGAATCTAGTTCTAGTAATGCAGCAACCTTTGCAAGCTCCTTGTGGAGTTCGGCCAATGATGGCCGTTA 1103 0.4288 MSYVESVKVSRRHYYPVAVSSSLFSRNVSLSPDFLPRCFSPAVIEKGQLKHDDPKGENAETFRVFTASELKSATHGFHHSDKLGEGGFGSVYKGRLRDGTMVAVKVLSIELESMRGEREFVAELATLSHIKHENLVILRGCCVEGNHRYLVYDYMENNSVYSTFLSSEPKRAKFSWERRRLVCIDFGLAKLLRDENSYISTRVAGTLGYLAPEYASSGQVTRKSDVYSFGVLLLEIVSGRVVVDNYQETERFLVEKAWAAYEADNLLRMVDPVLNMNFDSEEAIRFLKVGLSCVQETAKLRPTMSQIVELLSNRMNVEDVSISKPGLVSDLRQIRIRKQQIDSSQESSSSNAATFASSLWSSANDGR 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01947 367 PANTHER RECEPTOR-LIKE KINASE 37 184 - -
Bva13g01947 367 PANTHER RECEPTOR-LIKE KINASE 185 341 - -
Bva13g01947 367 ProSiteProfiles Protein kinase domain profile. 77 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01947 367 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 185 341 - -
Bva13g01947 367 SUPERFAMILY Protein kinase-like (PK-like) 61 322 IPR011009 -
Bva13g01947 367 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Bva13g01947 367 Gene3D Transferase(Phosphotransferase) domain 1 154 326 - -
Bva13g01947 367 Pfam Protein kinase domain 181 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01947 367 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 184 - -
Bva13g01947 367 Pfam Protein tyrosine and serine/threonine kinase 79 170 IPR001245 GO:0004672|GO:0006468
Bva13g01947 367 MobiDBLite consensus disorder prediction 342 367 - -
Bva13g01947 367 Gene3D Phosphorylase Kinase; domain 1 48 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01947 Bva-Chr13 15717516 15719836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01947 65 366 Receptor kinase-like Gene Family AT1G53430 39.306 1.66e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva13g01947 Pkinase 4.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01947 - - gmx:100813945 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02584 04 23095247 23101724 Bva13g01947 13 15717516 15719836 BWGD
Bva13g01947 13 15717516 15719836 Bva13g01947 13 15717516 15719836 ECH