Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01941 ATGCTTAATCTTTCGAGTTTCTCATCGGCCATGGATGCGGTAGCGTGGAGAGGATTGCTGTACACAGTCTTCATactcaattttgttttggtttgccAGCTTATCCTCCTTCAACCTCTGGTTTCTGCATTCGACGGAAAATCTGGAGATGCTGCTGAGTTGTTTGAGAGGGTATCACAGAGTATAAAAGTGAAACGTTATAGTGAGGCACTTGACGATCTCAATGCTGCCATAGAAGCAGATCCAACCCTATCAGAAGCATACTTACGCCGTGCATCGCTTCTTCGCCAGTTATGCAGATATGAGGAATCTGAGAGGAACTACAAGAAGTTTCTGGAGTTAAAACCCAGAAATTCTGCTGCAGAAAAGGAGCTCTCCCAGTTGCTGCAGGCTCAAAGTGCTCTAGAAACGGCTAGTTCTCTATTTGATTCGGGCAACTTTACAAAATCCCTggaatatattgataaaatcgTCCttgttttttctccttcttgcTTGAAGGCTAAACTTCTGAAAGTGAAGTTGTTGATAGCTGATAGAGAGTACGAGGGTGCCATATCTGAGTCTGGATTTATTCTTaaggaagatgaaaataatttagaggCATTGTTGCTCCGTGGTCGTGCATACTACTATTTAGCTGATCATGAGGTTGCAGTGAGGCATTACCAGAAAGGTCTTCGCCTAGATCCAGAGCACAGTGAACTGAAAAAAGCATATTTTGGATTGAAAAATCTTCTGAAAAAGACTAAAAGTGCTGAAGACAATGCCAATAAGGGTAAGCTACGGTTAGCAGTGGAGGAATTTCAAGCAGCATTGGCATTAGACCCTAATCATCTTGCGCATAATGTACATCTTCATCTTGAGTTATGCAAAGTATTAGTCAAACGTGGCAGAGGAAAAGAAGCTTTGGACAGTTGCAGCAAAGCTCTTCAGATCAATAAGGATCTCACTGAAGCTCTTGTTCAGAGAGGAGAAGCTAAGCTCTTAACAGAGGATTGGGAGGGAGCTGTAGAAGATCTAAAAGCAGCTGCTCAAAATTCTCCTCAGGATATGAATATCCGTGAGGCACTAATGAGGGCTGAGAAAGCTTTAAAGATGAGCAAACGTAAGGACTTCTACAAGATTTTGGGGATCTCCAAAACTGCTTCTGTCTCTGATATAAAACGTGCATACAAGAAACTTGCCTTGCAATGGCATCCAGATAAGAATGTTGACAATAGGGATGAAGCTGAGGCTAAATTCCGAGAAATTGCTGCTGCATATGAGgttTTGAGTGATGAAGACAAACGCACAAGATATGACAGAGGGGAAGACCTTGAAGACATGGGAATGGGTGGTGGAGGTTTCAACCCCTTTGGTGGTGGGGGGCAGCAGTTTACCTTTACTTTTGATGGTGGCTTCCCTGGTGGTGGTGGCTTTGGTGGGGGCTATCCTGGTGGATTTGGAGGAGGCTATCCTGGTGGCGggtttgaatttcatttttg 1487 0.4116 MLNLSSFSSAMDAVAWRGLLYTVFILNFVLVCQLILLQPLVSAFDGKSGDAAELFERVSQSIKVKRYSEALDDLNAAIEADPTLSEAYLRRASLLRQLCRYEESERNYKKFLELKPRNSAAEKELSQLLQAQSALETASSLFDSGNFTKSLEYIDKIVLVFSPSCLKAKLLKVKLLIADREYEGAISESGFILKEDENNLEALLLRGRAYYYLADHEVAVRHYQKGLRLDPEHSELKKAYFGLKNLLKKTKSAEDNANKGKLRLAVEEFQAALALDPNHLAHNVHLHLELCKVLVKRGRGKEALDSCSKALQINKDLTEALVQRGEAKLLTEDWEGAVEDLKAAAQNSPQDMNIREALMRAEKALKMSKRKDFYKILGISKTASVSDIKRAYKKLALQWHPDKNVDNRDEAEAKFREIAAAYEVLSDEDKRTRYDRGEDLEDMGMGGGGFNPFGGGGQQFTFTFDGGFPGGGGFGGGYPGGFGGGYPGGGFEFHF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01941 495 SUPERFAMILY Chaperone J-domain 365 476 IPR036869 -
Bva13g01941 495 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 5 477 IPR044620 -
Bva13g01941 495 Gene3D DnaJ domain 370 476 IPR036869 -
Bva13g01941 495 ProSiteProfiles dnaJ domain profile. 372 438 IPR001623 -
Bva13g01941 495 Coils Coil 118 138 - -
Bva13g01941 495 Gene3D Tetratricopeptide repeat domain 42 369 IPR011990 GO:0005515
Bva13g01941 495 ProSitePatterns Nt-dnaJ domain signature. 415 434 IPR018253 -
Bva13g01941 495 CDD DnaJ 372 427 IPR001623 -
Bva13g01941 495 Pfam DnaJ domain 372 435 IPR001623 -
Bva13g01941 495 Pfam Tetratricopeptide repeat 201 233 IPR013105 -
Bva13g01941 495 ProSiteProfiles TPR repeat profile. 85 118 IPR019734 GO:0005515
Bva13g01941 495 ProSiteProfiles TPR repeat profile. 200 233 IPR019734 GO:0005515
Bva13g01941 495 Pfam Tetratricopeptide repeat 86 117 IPR019734 GO:0005515
Bva13g01941 495 PRINTS DnaJ domain signature 410 430 IPR001623 -
Bva13g01941 495 PRINTS DnaJ domain signature 392 407 IPR001623 -
Bva13g01941 495 PRINTS DnaJ domain signature 374 392 IPR001623 -
Bva13g01941 495 PRINTS DnaJ domain signature 430 449 IPR001623 -
Bva13g01941 495 Coils Coil 408 428 - -
Bva13g01941 495 SUPERFAMILY TPR-like 63 367 IPR011990 GO:0005515
Bva13g01941 495 SMART tpr_5 200 233 IPR019734 GO:0005515
Bva13g01941 495 SMART tpr_5 284 317 IPR019734 GO:0005515
Bva13g01941 495 SMART tpr_5 85 118 IPR019734 GO:0005515
Bva13g01941 495 SMART tpr_5 246 279 IPR019734 GO:0005515
Bva13g01941 495 SMART tpr_5 51 84 IPR019734 GO:0005515
Bva13g01941 495 SMART tpr_5 318 351 IPR019734 GO:0005515
Bva13g01941 495 SMART dnaj_3 371 430 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01941 Bva-Chr13 15693606 15698034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01941 368 435 C2H2 Transcription Factor Family AT1G74250 45.833 2.06e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01941 K09523 - cpap:110815801 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01941 13 15693606 15698034 Bva13g01941 13 15693606 15698034 ECH