Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01938 ATGATGGAGAAAAATCCCAATTTGGAAATTCAACTCCCTCCTGGATTCAGATTCTACCCATCTGATGAGGAGCTCATTGTTCACTATCTGAGAAACAAAGTGACTTCTTGTCCCCTCCCTGCTTCTTTCATTGCAGAAATTGATCTCTACAAGTATAATCCATGGGAGCTTCCAAGCAAAGCTTTGTTTGGAGATGAAGAATGGTTTTTCTTTACTCCTAGGGACAGGAAGTATCCAAATGGGGTGAGGCCAAACAGAGCTGCTGGTTCAGGTTACTGGAAGGCTACTGGGACTGATAAACCCATTCTCACTTCATGTGGAATGAAGAGCATTGGGGTGAAGAAAGCCCTTGTGTTCTACAAGGGACGCCCTCCAAAGGGATCTAAAACAGATTGGGTGATGCATGAATATAGGTTACTTGATTCAATGACCTTGAAGTCCAAGCAAAGAGGGTCCATGTCCATGAGATTGGATGATTGGGTGCTATGCCGGGTTCGACAAAAAACTGGAAGCCCTCGGGAAGATTCAAATGAATCTATCCATGATCCTACAAGCTACTTTCAACAGATGAATGTGAACCCTAATCCTGAACAGATCAAAAACTCCATGGACAATGAGTTCCCAATGTTACCTTACACTCTGACTACTGAGAGTACTGTTCCTTCTGTTGCTATAGCCTCAAACATAAGCTTTCAATCATCTGTTTCACTCCAAGAAGACAACTCAAGTAAAATAGAAGCACAGCTCCTAGAATGTGCTGCCGAAGGCTTGCTTAATCCGCTAAAGAGAAAAGccatagaagaaaatgagttggaattttatttttctccctaTAAGAAGCTAAGCGCAGGAGAAGATGAGAAGGACAAGAGAGTTGAGATAGCTTTAAGCAAATACTACGATCACTGGAGTTCCATTACACAACCTCAAGAGCTGACTAATTTGCTTACTTTGCCTTTTTCAGGATATATAGGAGggatata 983 0.4049 MMEKNPNLEIQLPPGFRFYPSDEELIVHYLRNKVTSCPLPASFIAEIDLYKYNPWELPSKALFGDEEWFFFTPRDRKYPNGVRPNRAAGSGYWKATGTDKPILTSCGMKSIGVKKALVFYKGRPPKGSKTDWVMHEYRLLDSMTLKSKQRGSMSMRLDDWVLCRVRQKTGSPREDSNESIHDPTSYFQQMNVNPNPEQIKNSMDNEFPMLPYTLTTESTVPSVAIASNISFQSSVSLQEDNSSKIEAQLLECAAEGLLNPLKRKAIEENELEFYFSPYKKLSAGEDEKDKRVEIALSKYYDHWSSITQPQELTNLLTLPFSGYIGGI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01938 327 SUPERFAMILY NAC domain 9 168 IPR036093 GO:0003677|GO:0006355
Bva13g01938 327 PANTHER NAC TRANSCRIPTION FACTOR 56 2 289 - -
Bva13g01938 327 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Bva13g01938 327 ProSiteProfiles NAC domain profile. 12 168 IPR003441 GO:0003677|GO:0006355
Bva13g01938 327 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 289 - -
Bva13g01938 327 Gene3D NAC domain 21 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01938 Bva-Chr13 15675733 15676913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01938 11 173 NAC Transcription Factor Family AT1G61110 66.864 2.89e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva13g01938 NAM 8.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01938 - - lja:Lj1g3v4579400.1 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01938 13 15675733 15676913 Bva13g01938 13 15675733 15676913 ECH