Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01937 ATGAGCGTGATCGACATTCTAACAAGAGTAGATTCGATTTGCAAGAAGTACGACAAATACGACGTTGACAAGCAACGGGATTCTAATATCTCCGGCGAAGATGCCTTTGCTCGACAATACGCTCTCGTCGAAGCCGACATCGAGGCCTTACTTCAGAAAGCAGAAACTGCTAACAAGGAGAAAAGTAGGGCATCAACAGTAGCGATCAATGCCGAGATACGTCGTACCAAGGCTCGGTTGTTGGAGGAGGTCCCCAAATTGCAGAGATTGGCCAtgaaaaagGTAAAGGGGCTTTCATCAGAAGAATTTGCTGCTCGTAATGATTTGGTTCTTGCATTGCCGGAGAGGATCCAAGCTATTCCAGACGGGACTCCTGCTCCACCCAAACAAACTGGAGGTTGGGCATCTTCTGCTTCACGcactgaaattaaatttgattcagATGGGCAATTTGACGATGAATACTTCCAACAAACTGAGGAATCTAGTGGATTCAGGCAGGAGTATGAAATGAGGAGAATCAAGCAGGATCAAGGTTTGGATATGATCTCAGAAGGCTTGGATACATTGAAAAACATGGCACATGATATGAACGAGGAAATGGATCGACAAGTTCCGATGATGGATGAGATTGACACTAAGGTGGACAAGGCAGCTTCTGACCTCAAGAATACCAATGTCAGACTTAAGGACACAGTTAACCAGCTTCGATCCAGTCGAAACTTCTGTATCGATATAGTTTTGTTGTGTATAATTCTGGGGATTGCTGCTTATTTATACAATGTTCTaaagaaata 797 0.4253 MSVIDILTRVDSICKKYDKYDVDKQRDSNISGEDAFARQYALVEADIEALLQKAETANKEKSRASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSEEFAARNDLVLALPERIQAIPDGTPAPPKQTGGWASSASRTEIKFDSDGQFDDEYFQQTEESSGFRQEYEMRRIKQDQGLDMISEGLDTLKNMAHDMNEEMDRQVPMMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIVLLCIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01937 265 CDD SNARE_Qc 175 230 - -
Bva13g01937 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Bva13g01937 265 SMART tSNARE_6 165 232 IPR000727 -
Bva13g01937 265 Coils Coil 40 67 - -
Bva13g01937 265 Pfam SNARE domain 207 256 IPR000727 -
Bva13g01937 265 Gene3D - 170 231 - -
Bva13g01937 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Bva13g01937 265 SUPERFAMILY SNARE fusion complex 164 230 - -
Bva13g01937 265 Coils Coil 219 239 - -
Bva13g01937 265 PANTHER SYNTAXIN-73 1 261 - -
Bva13g01937 265 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01937 Bva-Chr13 15671322 15674218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01937 1 264 SNARE and Associated Proteins AT3G09740 78.947 2.78e-157 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01937 K08506 - gmx:100804155 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01937 13 15671322 15674218 Bva13g01937 13 15671322 15674218 ECH