Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01930 ATGTTGGAACTTTCTTGCCTATTTTCGACCACCCTCTTTGTTATTCTATGCTTTTTCAACAGTGTCGTTACCATCGCCACCACTGAATTCGACTTCGGGACCTTGACTTTAAGCAGTCTCAAGCTCCTGGGAGATGCCCACTTGAACAATGGGAGCGTTAGCCTCACTCGGGACCTCGCCGTCCCCAACTCTGGTGCTGGCAGAGTTCTCTACTCAAGGCCAGTGAGATTCCGGCAACCTGGTTCTCACTTTCCGGCGAGTTTCAAGacctttttctccttttcaatTACCAATTTGAATCCTTCATCTATTGGCGGGGGACTGGCTTTTGTAATCTCGCCGGACGATGAGACCGTTGGTGAAGCCGGTGGGTTCCTTGGCCTCCTTAGCATTGAGGGCTCTGCCTCGGGTTTCCTCGCAGTTGAGTTCGATACTCTCATGGACGTTGAGTTCAAGGACATCAACGGAAACCATGTTGGTCTTGACCTGAACAGCATGGTTTCAACTCAAGTTCGTGACTTGGAATCCATTGGAATCGATCTTAAAAGCGGTGATCTTGTGAACGTGTGGATCGAATATGACGGCTCCACTCGGGGATTTGCCATCTGGGTTTCGTACTCGAATCTAAAACCAAAGGATCCATTTCTGTCATTCAATCTTGATCTAGATCAGTACGTAAACGACTTAATGTATGTGGGTTTCTCTGGTTCAACACAGGGAAGTACAGAGATTCACAAAATAGAGTGGTGGAGCTTTAGCTCTTCCTTTGACTCCAACCCCCCTTCTGGACCAGGATCACTGGCGCCGCCGCCGCCAACTGTTAGTTTGATGAACCCAACTGCTAATTCAGTGAAGGCACCACCTCCTTCATTGGCTCCTTCTTCTAATTCGATTGCCAACACTCAAAAGGATAGTAAATCATCTTGCCACAATGGGCTCTGTAAACAGGGTCCTGGTGCTGTAGCCGGCGTTGTGACGGCAGGAGCTTTTGTTCTAGCCTTGTTCGCTGGCGCATTCATCTGGGTTTACTCTAAGAAGGTCAAACACGTTAAAAAATCGGAGTCATTTCCGTcagaaattatcaaaatgccaaaagaattcagcTACAGAGAGCTCAAAACAGCCACCAAGTGTTTCAATGCAAATAGAATTATTGGTCACGGCGCATTTGGAACGGTCTATAAGGGCATATTGCCGGAGAATGGCGACATTGTTGCAGTGAAGAGATGCAGCCATAGTAGTCAAGGGAAGAATGAATTCTTATCTGAATTATCCATAATTGGGAGTCTAAGACATCGAAATCTTGTTCGTCTTCAAGGTTGGTGCCACGAGAAAGGCGAAATTTTATTAGTCTATGACTTAATGCCAAATGGGAGCTTAGATAAAGTATTATTTGAGGCCAGAACGCCTCTGCCATGGCCTCACAGGCGCAAAATTTTGTTAGGGGTTGCCTCCGCTTTAGCATACTTGCATCAAGAGTGCGAAAACCAAGTAATTCACAGAGATGTCAAGACTAGCAATATTATGTTAGACGAAGATTTCAATGCCCGGTTGGGCGATTTTGGTTTAGCAAGGCAAACGGAGCACGACAAGTCACCGGACGCGACGGTGGCCGCCGGAACAATGGGGTACCTGGCGCCGGAGTATCTCCAGACAGGTAGAGCCACAGAGAAAACTGATGTGTTCAGTTACGGTGCTGTGGTTCTTGAGGTGGCTAGTGGGAGGAGACCCATTGAGAAAGACACCGGTGGGGTTGGTAAAGTTGGGCTGAACAGTAATTTGGTGGAATGGGTTTGGAGTTTGCACCGCGAAGGAAGGTTGTTAATGGCAGCAGATCCGAGGCTTGAGAATGAGTTTGACGAGGGAGAGATGAGGAGGGTGCTTTTGGTTGGGCTAGCTTGTTCCCACCCTGACCCCATGAACAGGCCCACAATGAGAGCTGTGGCTCAAATGCTGGTTGGGGAAGCTCAAGTTCCCATTGTCCCGACAGCAAAGCCATCTACAAGGTTTACCACTTCCCAATTGTTAATGAGCTTGCAGGACAGTTTATCCGACTGTAACGGTATAATTACCATGTCTCCCTCCTCCTCATCGGAAAACAGCTTCAACGGCGGAGATATAGTTTG 2126 0.4694 MLELSCLFSTTLFVILCFFNSVVTIATTEFDFGTLTLSSLKLLGDAHLNNGSVSLTRDLAVPNSGAGRVLYSRPVRFRQPGSHFPASFKTFFSFSITNLNPSSIGGGLAFVISPDDETVGEAGGFLGLLSIEGSASGFLAVEFDTLMDVEFKDINGNHVGLDLNSMVSTQVRDLESIGIDLKSGDLVNVWIEYDGSTRGFAIWVSYSNLKPKDPFLSFNLDLDQYVNDLMYVGFSGSTQGSTEIHKIEWWSFSSSFDSNPPSGPGSLAPPPPTVSLMNPTANSVKAPPPSLAPSSNSIANTQKDSKSSCHNGLCKQGPGAVAGVVTAGAFVLALFAGAFIWVYSKKVKHVKKSESFPSEIIKMPKEFSYRELKTATKCFNANRIIGHGAFGTVYKGILPENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKVLFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEDFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLQTGRATEKTDVFSYGAVVLEVASGRRPIEKDTGGVGKVGLNSNLVEWVWSLHREGRLLMAADPRLENEFDEGEMRRVLLVGLACSHPDPMNRPTMRAVAQMLVGEAQVPIVPTAKPSTRFTTSQLLMSLQDSLSDCNGIITMSPSSSSENSFNGGDIV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01930 708 Gene3D Transferase(Phosphotransferase) domain 1 455 659 - -
Bva13g01930 708 Pfam Legume lectin domain 29 260 IPR001220 GO:0030246
Bva13g01930 708 MobiDBLite consensus disorder prediction 260 304 - -
Bva13g01930 708 PANTHER - 19 702 - -
Bva13g01930 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Bva13g01930 708 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 19 702 - -
Bva13g01930 708 Pfam Protein kinase domain 380 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01930 708 SMART serkin_6 379 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01930 708 ProSitePatterns Protein kinases ATP-binding region signature. 385 408 IPR017441 GO:0005524
Bva13g01930 708 SUPERFAMILY Protein kinase-like (PK-like) 361 688 IPR011009 -
Bva13g01930 708 CDD lectin_legume_LecRK_Arcelin_ConA 44 247 IPR001220 GO:0030246
Bva13g01930 708 ProSiteProfiles Protein kinase domain profile. 379 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01930 708 Gene3D Phosphorylase Kinase; domain 1 340 454 - -
Bva13g01930 708 MobiDBLite consensus disorder prediction 277 304 - -
Bva13g01930 708 CDD STKc_IRAK 385 652 - -
Bva13g01930 708 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 257 IPR013320 -
Bva13g01930 708 Gene3D - 26 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01930 Bva-Chr13 15639230 15642010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01930 4 689 Receptor kinase-like Gene Family AT3G53380 71.758 0.0 968
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva13g01930 Pkinase 7.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01930 - - jre:108995658 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01930 13 15639230 15642010 Bva13g01930 13 15639230 15642010 ECH