Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01929 ATGGCCGATGACTTTGAGTTTGCCGATAAAGTTCCTCCTTCTTTCGATCGCGTGGGAGATGTGCTTAAGAATTCTGAAGCCAAAGGATTCAACCCGGGATTGATAGTTTTGCTGGTTGTTGTTGGATTGCTGTTGATATTCCTCATTGGAAATTATGTACTTTATTCGTATGCACAGAAGACTCTTCCTCCTAGAAAGAAGAAGCCAATctcaaagaagaagatgaaaagggAGAAACTGAAGCAAGGCGTCTCTGCACCTGGAGAGTG 269 0.3978 MADDFEFADKVPPSFDRVGDVLKNSEAKGFNPGLIVLLVVVGLLLIFLIGNYVLYSYAQKTLPPRKKKPISKKKMKREKLKQGVSAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01929 89 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 89 - -
Bva13g01929 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Bva13g01929 89 PANTHER DNA-BINDING PROTEIN S1FA2 3 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Bva13g01929 89 MobiDBLite consensus disorder prediction 62 89 - -
Bva13g01929 89 MobiDBLite consensus disorder prediction 65 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01929 Bva-Chr13 15634926 15636376 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Bva13g01929 S1FA 3.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01929 - - jre:109012820 143.28