Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01909 ATGGTGAGTGGGCTTCCGctcctcctctctctcttgctCGTACTACTATTCCTCTTGCACCGTTCATCGGCTCAGATGCCAGGTTTTATAAGTTTGGACTGTGGaggtaaagaaaatttcaccgacgaacttggtcttaATTGGACTCCTGATGATAAACTTACTAATGGAGAAGCAAGTACTATATTAGTAGCAAATGAGACAAGGAAGCAATACATGACGTTAAGACATTTTCCTGCCGATTCGAGGAAATACTGCTACCAGCTTGATGTTGTCCGTAGGACAAGGTATCTATTGAGGGCAACCTTCTTGTATGGAAACTTTGATAATAACAATGTGTATCCAAAATTTGACCTTTCCTTTGGGGCTACTCCTTGGTCTACAATTGTTATATCCGATGCTAATTCTATAGAGATGCGAGAGCTTATATTTCTGGCTACAAGTTCTCCTGTTAGTGTTTGTTTATCAAATGCAACAACTGGGCAACCATTCATATCTACGCTTGAACTTCGGCAATTCAATGGTTCAGTTTATTATACAGAACTTGAGCAGCAGTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATCAGGTACCCTGATGATCCTTTTGATCGAATTTGGGAGTCAGATTCAGTCAAGAAAGCAAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAGATTTCCACGGACTTACCAATTGATGTTAACAGAGATGAAATGCCACCAGTGAAAGTGATGCAGACAGCAGTAGTGGGTAGATATGGATCTCTAACTTATAGGTTAAACTTGGATGGTTTTCCTGGTATGGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATTTGGAGCCAGATGAGTCCAGAAAATTTAGGCTTGTGCTTCCTGACCACCCTGAAATCAGCAAGGCTGTTGTTAATATTGAGGAAAATGCTCAAGGAAAATATCGCCTTTATGAGCCCGGATTTACCAATTTATCCCTGCCCTTTGTTCTATCTTTTAGATTTGGCAAGACATCTGATTCTTCCAGGGGACCTCTTGTAAATGCCATGGAGATAAATAAGTATCTGGAGAAAAATGATGGCTCTCAAGATGGAGAAGCTATTGCAAATGTGCTTTCACATTACTCTTCAGCAGACTGGGCGCAAGAAGGAGGTGACCCATGCCTACCTGCTCCATGGTCATGGGTCCACTGTAGCTCAGATCCACAACCAAGAATAGTTTCAATTTTGTTGTCTGGTAAAAATTTGACTGGAAATATTCCTTCAGACATCACCAAATTGACTGGTCTCTTTGAACTATGGCTTGACAGAAATATATTAACTGGACCAATACCAGATTTTACTGGATTCATGGACTTGAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGCGCTCCCTTCCTCTTTGGTGAATCTCCCAAATTTGAGGGAACTGTATGTGCAAAACAATATGTTATCTGGAACAGTGCCATCAGGCCTTTTGAGTAAAGATTTGGTTTTGAACTACTCTGGAAATGCTAATCTTTATAAAGGAGGCAGTAAAAAGAACCTCATTTATGTCATTATTGGTTCATCAGTTGGGGCTGCTCTTCTACTTTTAACTACTGTTATATCTTGTCTGTTTATGCgcaagggaaagaaaagatacTATGAGCAAGACCAACTTATTTCCCTTCCTGCTCAAAGGCTACCTTCTAAAAGCGATGGTCCCACAGAAGTTGCACACTGCTTCAGTTTTCTTGAAATTCAAAATGCCACAAGTAACTTCGAGAAGAGAATCGGTTCTGGGGGTTTTGGAGTTGTATACTATGGGAAACTGAAAGACGGAAAAGAGATTGCAGTTAAAGTTCTAACCAGTAATTCCTATCAGGGGAAGCGAGAATTTTCCAATGAGGTGACTCTTCTTTCAAGGATACATCACAGGAACTTGGTACAGCTTCTTGGGTATTGCCGAGAAGAAGGGAACAGTATGCTTGTTTACGAATTTATGCATAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACGTGGACTGAGTATCAATTGGATTAAACGGCTTGAGATTGCAGAAGATGCTGCTAAAGGGATTGAATATCTCCACACGGGTTGCGTTCCTGCTGTGATCCATAGAGACTTGAAAAGCAGCAATATTCTTCTTGACAAGCAAATGAGAGCTAAAGTCTcagattttggtctttcaaaACTTGCTGTAGATGGAGTGTCCCATGTTTCGAGCATAGTTCGGGGCACAGTAGGATATTTGGATCCTGAGTACTATATTTCCCAGCAGCTGACTGATAAGAgtgatatttatagttttggtgTCATTCTTCTAGAATTGATATCCGGTCAAGAAGCAATATCCAATGAAAGCTTTGGTGTCAATTGCCGAAACATAGTACAATGGGCAAAATTACACATTGAGAGCGGAGATATACAGGGTATTATTGATCCCTCGCTACACAATGATTACGACCTACAATCAATGTGGAAAATAGCAGAGAGAGCATTGATGTGTGTTCAGCCTCATGGACATATGCGGCCATCAATTTCAGAAGTCCTCAAGGAGATCCAAGATGCAATCTCTCTTGAGAGAGAGACTCAAACACGTCCGATCCCTCTCCATTCTCACCGATCTAAAAGCTCTCAAACTCGCGCCAAATACAAATCCCATCACATCCCCAGTTTTCCGGCGAGGATGGCTGAAGGTCAGGGGAGTCCAGGCGGCGGTAGCCACGAGAGCGGTGAGCAGAGCCCTCGCTCTAACCTCCGTGAACAGGATAGGTACTTGCCGATCGCTAATATCAGCCGGATCATGAAGAAGGCGCTTCCTGCTAATGGAAAAATCGCCAAGGATGCCAAGGAGACTGTGCAAGAATGCGTCTCTGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGtcagagagagaagaggaagacAATTAACGGTGATGATTTACTTTGGGCAATGGCGACTTTAGGATTTGAGGACTATATTGACCCCCTTAAGATTTACCTGAGCAGATACAGAGAGATGGAGGGTGATACCAAGGGTTCAGCCAAGGGTGGAGATGCATCTGCTAAGAAAGACATTCAATCAAGTTCGAATGCTCAGCTTGCCCATCAAGGGTCTTTTTCGAAAGGCGTTACTTACACAAATTCTCAGGCTCAACATATGATGGTTCCTATGCAAGGCCCGGAGTA 3251 0.4079 MVSGLPLLLSLLLVLLFLLHRSSAQMPGFISLDCGGKENFTDELGLNWTPDDKLTNGEASTILVANETRKQYMTLRHFPADSRKYCYQLDVVRRTRYLLRATFLYGNFDNNNVYPKFDLSFGATPWSTIVISDANSIEMRELIFLATSSPVSVCLSNATTGQPFISTLELRQFNGSVYYTELEQQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTDLPIDVNRDEMPPVKVMQTAVVGRYGSLTYRLNLDGFPGMGWAFTYFAEIEDLEPDESRKFRLVLPDHPEISKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFRFGKTSDSSRGPLVNAMEINKYLEKNDGSQDGEAIANVLSHYSSADWAQEGGDPCLPAPWSWVHCSSDPQPRIVSILLSGKNLTGNIPSDITKLTGLFELWLDRNILTGPIPDFTGFMDLKIIHLENNQLTGALPSSLVNLPNLRELYVQNNMLSGTVPSGLLSKDLVLNYSGNANLYKGGSKKNLIYVIIGSSVGAALLLLTTVISCLFMRKGKKRYYEQDQLISLPAQRLPSKSDGPTEVAHCFSFLEIQNATSNFEKRIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGNSMLVYEFMHNGTLKEHLYGPLTRGLSINWIKRLEIAEDAAKGIEYLHTGCVPAVIHRDLKSSNILLDKQMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPSLHNDYDLQSMWKIAERALMCVQPHGHMRPSISEVLKEIQDAISLERETQTRPIPLHSHRSKSSQTRAKYKSHHIPSFPARMAEGQGSPGGGSHESGEQSPRSNLREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREMEGDTKGSAKGGDASAKKDIQSSSNAQLAHQGSFSKGVTYTNSQAQHMMVPMQGPE 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01909 1083 CDD STKc_IRAK 604 871 - -
Bva13g01909 1083 Gene3D Ribonuclease Inhibitor 374 523 IPR032675 -
Bva13g01909 1083 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 942 1006 IPR003958 -
Bva13g01909 1083 ProSiteProfiles Protein kinase domain profile. 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01909 1083 SMART serkin_6 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01909 1083 SUPERFAMILY Protein kinase-like (PK-like) 583 891 IPR011009 -
Bva13g01909 1083 SUPERFAMILY Histone-fold 939 1041 IPR009072 GO:0046982
Bva13g01909 1083 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Bva13g01909 1083 Pfam Protein tyrosine and serine/threonine kinase 600 800 IPR001245 GO:0004672|GO:0006468
Bva13g01909 1083 SUPERFAMILY L domain-like 401 515 - -
Bva13g01909 1083 MobiDBLite consensus disorder prediction 1031 1060 - -
Bva13g01909 1083 PANTHER TYROSINE KINASE DOMAIN PROTEIN 13 891 - -
Bva13g01909 1083 MobiDBLite consensus disorder prediction 877 939 - -
Bva13g01909 1083 ProSitePatterns NF-YB/HAP3 subunit signature. 973 989 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva13g01909 1083 Gene3D Histone, subunit A 930 1064 IPR009072 GO:0046982
Bva13g01909 1083 MobiDBLite consensus disorder prediction 1044 1060 - -
Bva13g01909 1083 PRINTS CCAAT-binding transcription factor subunit A signature 989 1007 - -
Bva13g01909 1083 PRINTS CCAAT-binding transcription factor subunit A signature 1008 1026 - -
Bva13g01909 1083 PRINTS CCAAT-binding transcription factor subunit A signature 970 988 - -
Bva13g01909 1083 Gene3D Transferase(Phosphotransferase) domain 1 674 890 - -
Bva13g01909 1083 Pfam Malectin-like domain 32 362 IPR024788 -
Bva13g01909 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Bva13g01909 1083 PANTHER OS07G0107800 PROTEIN-RELATED 13 891 - -
Bva13g01909 1083 Gene3D Phosphorylase Kinase; domain 1 575 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01909 Bva-Chr13 15522644 15532876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01909 22 708 Receptor kinase-like Gene Family AT2G37050 69.353 0.0 995
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva13g01909 Malectin_like 4.3e-75 CL0202
TF NF-YB Bva13g01909 Malectin_like 4.3e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01909 - - gmx:100784017 1517.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02617 04 23249414 23253187 Bva13g01909 13 15522644 15532876 BWGD