Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01894 ATGGATGTGAAGGAAGCAGAAAGAGTAGTTGTAGCTAAACCAGTTGCTTCTAGACCCAGTGGCTCCACTTTCAGATCTTTCTCAGAGCTACTTGCTGGTGCCATTAACGATGAGCCTCCCCCACttgaaacttctccaactACAGTTGCAGCCATTAGACCAAAGACTGCGAGGTTCAAGCCAGCCACCAATCGCACCGCCCCTGCTGGATTCCCTTCTTCTCAGGCTGATATATCTGCAACTTCACCTTGTAACTCTTCTGACAAGACCCAAAAATCAGACACTAGACAGTCTGTGATATACAAGCCAATGGCGAAACTTGTATCAAAGACCACTGTTTCTCTTTTGGCAAATATGggaaactgcattACTAGTCAGCCACAGCCAAGGCAATCAATAGAGGCTGGTCTCCAACATGTCAAcacagaaaaatttaaatcaaatttgagtTCAAATCTTGTTCAGGTTCAGAGtagcacccctcatgcacatgCTGATTCAAATCCGACAAGTGAGGCTAGTAAGGTGGCATCGCAGAACCAAGAGGAGGACCCAAAGACTTTGCCATCCACAAGTAACGGCAATGGTGATCGACCTTCTTATGATGGATACAACTGGAGGAAATATGGGCAAAAGCAAGTTAAGGGAAGCGAGTATCCGCGGAGTTACTATAAATGCACATATCCTAATTGTCcagtgaaaaagaaagttgaaagaTCATTTGATGGGCAGATTGCAGAGATTGTTTATAAAGGTGAGCACAACCACTCAAAGCCTCAGCCTCCTAAACGCAACTCAGCAGTCACACAAGGGTCAGGATCAGGAATTGTATCTGATGCAGTGGCTCAAGATGCTAACAATAATTTATGGAGTAACGGTAATACTAATTACCCAGATGAGAGGAATGAAAGCAGAATAGAGAATCAGAATGATACAGGAGTATCTGCTCAGTCAACCCATCAGGTCAAGGCTCCACAGACTAATGATTCTGCTGGAACTGGTGCCATTAATGCTGGCGGAGGAAGTCCTGAAAATTCGTTGGGTCTCAGTGGGGAATGCGAGGAAGGAAGCAAAGGGTTTGAGGCAGAAGAAGTTGAACGCAGAAGTAAAAAGAgTAGGAGAAGTGAGAATCAATCTAATGAAGCAGCAGCATCAGAGGAAGGTTTACAAGAGCCTCGCGTTGTGGTACAAAATTCTACAGATTCTGAAATTGTTGGAGATGGCTTCCGCTGGAGGAAATATGGACAGAAGGTGGTGAAGGGCAATCCATATCCCAGGAGTTACTATAGATGCACAAATACAAAGTGTAACATGCGGAAGCACGTGGAAAGAGCAATGGATGACCCAAGATCATTCATCACTACATACGAGGGAAAGCACAACCATGAAATGCCAATGAGGAACACAGGTTCTGCAGCCTGTGAGAGAGATTCACAGTCACAGGCACAGGCCCCTCTTAGCAAAAACAAGTCTTG 1475 0.4237 MDVKEAERVVVAKPVASRPSGSTFRSFSELLAGAINDEPPPLETSPTTVAAIRPKTARFKPATNRTAPAGFPSSQADISATSPCNSSDKTQKSDTRQSVIYKPMAKLVSKTTVSLLANMGNCITSQPQPRQSIEAGLQHVNTEKFKSNLSSNLVQVQSSTPHAHADSNPTSEASKVASQNQEEDPKTLPSTSNGNGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQPPKRNSAVTQGSGSGIVSDAVAQDANNNLWSNGNTNYPDERNESRIENQNDTGVSAQSTHQVKAPQTNDSAGTGAINAGGGSPENSLGLSGECEEGSKGFEAEEVERRSKKSRRSENQSNEAAASEEGLQEPRVVVQNSTDSEIVGDGFRWRKYGQKVVKGNPYPRSYYRCTNTKCNMRKHVERAMDDPRSFITTYEGKHNHEMPMRNTGSAACERDSQSQAQAPLSKNKS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01894 491 ProSiteProfiles WRKY domain profile. 400 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 MobiDBLite consensus disorder prediction 148 208 - -
Bva13g01894 491 MobiDBLite consensus disorder prediction 458 491 - -
Bva13g01894 491 MobiDBLite consensus disorder prediction 310 344 - -
Bva13g01894 491 ProSiteProfiles WRKY domain profile. 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 468 IPR044810 GO:0003700
Bva13g01894 491 SMART WRKY_cls 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 SMART WRKY_cls 405 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 MobiDBLite consensus disorder prediction 55 103 - -
Bva13g01894 491 MobiDBLite consensus disorder prediction 148 199 - -
Bva13g01894 491 MobiDBLite consensus disorder prediction 67 98 - -
Bva13g01894 491 MobiDBLite consensus disorder prediction 252 274 - -
Bva13g01894 491 Gene3D WRKY domain 390 466 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 Gene3D WRKY domain 184 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 MobiDBLite consensus disorder prediction 310 394 - -
Bva13g01894 491 Pfam WRKY DNA -binding domain 407 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 Pfam WRKY DNA -binding domain 202 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 MobiDBLite consensus disorder prediction 472 491 - -
Bva13g01894 491 SUPERFAMILY WRKY DNA-binding domain 199 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 SUPERFAMILY WRKY DNA-binding domain 400 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g01894 491 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 468 - -
Bva13g01894 491 MobiDBLite consensus disorder prediction 356 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01894 Bva-Chr13 15430308 15433921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01894 93 466 WRKY Transcription Factor Family AT2G37260 45.833 8.92e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva13g01894 WRKY 5.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01894 - - qsu:112005308 612.838