Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01893 ATGGGTTGGATTCCCTGTTCTGGAAATTCAAACActaagaagaagataaagaagaagatgaagaacatGGAAGTGGAGGAGAATCTGGCTGATCAGATCAAACAGGCCCCAGGGAAGTTGAAGACTAGTGACGGCTCGTCAAATGGGAACCCTGATCACATTGCAGCACAGACTTTCACGTTCCGTGAGTTGGCAACTGCaactagaaattttaaaacagaATGTCTTTTGGGGGAGGGAGGTTTCGGTAGAGTATACAAAGGCCGCTTGGAAAGTACCAATCAGGTTGTAGCAATTAAGCAACTTGACCGAAATGGGCTGCAAGGGAACAGAGAGTTCCTAGTCGAAGTGTTGATGTTAAGTCTACTCCACCACCCTAACCTTGTCAACCTTATTGGTTATTGTGCTGACGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCATTAGGATGCTTGGAAGACCACTTACATGATATTTCTCCTGGCAAAAAACGACTTGACTGGAATACTCGAATGAAAATAGCTGCTGGGGCGGCAAAGGGATTGGAATATCTTCATGACAAAGCTAACCCTCCTGTCATATACCGAGATTTAAAGTGCTCAAACATTTTGCTTGGTGAAGGTTATCATCCAAAGTTATCAGATTTTGGCTTGGCTAAACTTGGACCAGTTGGCGAGAACACCCATGTATCAACTAGGGTTATGGGCACCTATGGATATTGCGCTCCAGAGTATGCAATGACAGGTCAATTAACTCTCAAATcagatgtttatagttttggcGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCAATTGACAATTCAAAAGCGGCAGGAGAGCAGAATCTTGTTGCATGGGCCAGACCCTTGTTTAAAGATCGAAGAAAGTTTTCACAAATGGCTGACCCGATGCTCCAAGGCCAGTATCCTTCAAGAGGCTTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTACAGGAGCAGGCTAATATGCGCCCAGTTATAGCTGATGTTGTCACAGCTTTGTCTTACCTTGCTTCGCAAAAATATGACCCCAATACACAGGCAGTCCAAAGCTCCCGCCTTGCCCCGGCCACTCCTCCTAGAACCAAGAGGTG 1127 0.4268 MGWIPCSGNSNTKKKIKKKMKNMEVEENLADQIKQAPGKLKTSDGSSNGNPDHIAAQTFTFRELATATRNFKTECLLGEGGFGRVYKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGCLEDHLHDISPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQKYDPNTQAVQSSRLAPATPPRTKR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01893 375 SUPERFAMILY Protein kinase-like (PK-like) 52 345 IPR011009 -
Bva13g01893 375 ProSiteProfiles Protein kinase domain profile. 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01893 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Bva13g01893 375 Gene3D Phosphorylase Kinase; domain 1 44 147 - -
Bva13g01893 375 Gene3D Transferase(Phosphotransferase) domain 1 148 366 - -
Bva13g01893 375 MobiDBLite consensus disorder prediction 32 52 - -
Bva13g01893 375 Coils Coil 16 36 - -
Bva13g01893 375 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 375 - -
Bva13g01893 375 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bva13g01893 375 SMART serkin_6 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01893 375 Pfam Protein tyrosine and serine/threonine kinase 74 343 IPR001245 GO:0004672|GO:0006468
Bva13g01893 375 PANTHER OS07G0668900 PROTEIN 1 375 - -
Bva13g01893 375 CDD STKc_IRAK 77 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01893 Bva-Chr13 15425508 15428467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01893 31 350 Glycoside Hydrolase AT3G07070 67.178 4.80e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva13g01893 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01893 - - gmx:100499648 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02636 04 23340510 23340728 Bva13g01893 13 15425508 15428467 BWGD