Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01890 ATGGCAGCTGCTGGTGTGAAACAAGTTTTGCCTCCGTCTTTAACCTCCGCCTCCGACCCACCTCCGATTTTCGATGGAACCACCAGATTATACATCAGTTATGTTTGCCCTTTTGCACAGCGTGCATGGATCACCAGGAATTATAAGGGACTACAAGACAAGATCAAATTGGTTCCCATCGACCTTGAAAACAGACCTGCTTGGTACAAGGAGAAAGTCTATCCGGAAAATAAAGTGCCATCATTGGAGCACAATGGGAAGGTTTTGGGAGAGAGTcttgatttgattaaatatattgatgcCAACTTCGAAGGCCCCTCTCTATTTCCCAGTGATCCTGCCAAGCTAGAATTTGGTGAGCAGTTGATATCCCATGTTGATACATTCACCAAAGAATTGTATACTTCACTGAGAGGACCAGAGACTGTGCAACAAGCAAGCCCTGCTTTTGATTACTTGGAGAATGCTCTTGGTAAATTTGACGACGGACCATTCCTTCTTGGCCAATTTGGTTGGGTGGATGTTGCCTATATTCCTTTTGTTGAAAGATTCCAAGCTTTGTTCTTGGATTTGTTCAAGCATGATATCACCGCAGGAAGGCCAAAACTTGCAGCATGGATTGAGGCATTGAACAAGGTTGATGCTTACACGCAGACAATATATGATCCCAACGAAATCATTGAAATTTACAGGAGAAAATATGTGGCTCAGCAGTG 716 0.426 MAAAGVKQVLPPSLTSASDPPPIFDGTTRLYISYVCPFAQRAWITRNYKGLQDKIKLVPIDLENRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYIDANFEGPSLFPSDPAKLEFGEQLISHVDTFTKELYTSLRGPETVQQASPAFDYLENALGKFDDGPFLLGQFGWVDVAYIPFVERFQALFLDLFKHDITAGRPKLAAWIEALNKVDAYTQTIYDPNEIIEIYRRKYVAQQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01890 238 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 237 - -
Bva13g01890 238 Gene3D - 105 238 - -
Bva13g01890 238 SFLD Glutathione Transferase (cytosolic) 29 211 IPR040079 -
Bva13g01890 238 Pfam Glutathione S-transferase, C-terminal domain 142 209 - -
Bva13g01890 238 Gene3D Glutaredoxin 1 104 - -
Bva13g01890 238 SUPERFAMILY Thioredoxin-like 18 108 IPR036249 -
Bva13g01890 238 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Bva13g01890 238 SFLD Main (cytGST) 29 211 - -
Bva13g01890 238 CDD GST_C_Lambda 112 231 - -
Bva13g01890 238 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Bva13g01890 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 237 IPR044629 GO:0004364
Bva13g01890 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01890 Bva-Chr13 15408883 15411104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01890 11 235 Glutathione S-transferase Gene Family AT5G02790 67.111 6.95e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01890 K00799 - gmx:100793025 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02637 04 23344128 23346387 Bva13g01890 13 15408883 15411104 BWGD