Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01884 ATGGTTAGATCCTGCTGGAAACCTTATGCAGAGGGTGATGATGGTGATGCGAATGGGAGAGTAGATGGGTTGCTTTGGTACAAGGATTTAGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTAGTTCAAGCTAATAGTTCAATTGAGGATCGAAGCCAACTTGAATCTGGGCCCTTGAGTTTCAATCATTCGGGTCCTCAAGGAACCTTCATGGGGGTATATGATGGCCATGGTGGATTTGAGGCCTCGCAGTTTGTCAGTGACAATCTTTTCTGCAATCTCAAGAGATTTGCAGGAGAAGATCAAAGCATGTCAGAAGATGTGATCAAGAAGGCATTTTCTGCAACAGAGGAGGGTTTTCTCTCTCTGGTGAAGAGGCAATGGCGTAGCAATCCAAATATTGCATCCGCTGGGACGTGTTGTTTGGCAGGGATAATTTGCAATGGCATGTTATATATTGCAAACTCTGGTGACTCGAGGGTTGTGTTAGGAAGAATAGAGAGGACAACAAGGGAAGTAGGAGCCATTCAATTATCTGCAGAACATAATGTGAGCATAGAGACAGTAAGAGCTGAAGTTCGAGCTAAGCACCCTTATGATTCACAAATCGTTGTTATGAAGCACAAAGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCAAGATCAATAGGTGATGCTTATCTGAAAAGGGCAGAATTTAACAGGGAGCCTCTACCATACAAATTTAGATTGTCTGAGCCCTTCTTCAAGCCAATCCTTAGTTGGGAGCCATCAATGTCAACCCACAAAATCCATGCCGATGATCAGTTTCTGATATTTGCTTCCGATGGTTTATGGGAGCATCTCAGCAACCAAGAGGCTGTGAACATAGTCAGCAATTATCCACGCAATGGAATTGCCAAAAGGCTTGTGAAAGCTGCAATGCGAGAAGCAGCtaagaagagagaaatgagaTTCTCAGATCTGCAGAGGATTGAACAAGGAGTTAGGAGACACTTCCATGATGATATAACAGTAATAGTTGTATATCTTAATCCTAAACTCATTGATAATGCTTCTCTTTGGGGTTCTCCTCTTTCAATCAGAGGTGGCCCTGCCAACCCCTA 1109 0.4292 MVRSCWKPYAEGDDGDANGRVDGLLWYKDLGNHLYGEFSMAVVQANSSIEDRSQLESGPLSFNHSGPQGTFMGVYDGHGGFEASQFVSDNLFCNLKRFAGEDQSMSEDVIKKAFSATEEGFLSLVKRQWRSNPNIASAGTCCLAGIICNGMLYIANSGDSRVVLGRIERTTREVGAIQLSAEHNVSIETVRAEVRAKHPYDSQIVVMKHKVWRVKGLIQVSRSIGDAYLKRAEFNREPLPYKFRLSEPFFKPILSWEPSMSTHKIHADDQFLIFASDGLWEHLSNQEAVNIVSNYPRNGIAKRLVKAAMREAAKKREMRFSDLQRIEQGVRRHFHDDITVIVVYLNPKLIDNASLWGSPLSIRGGPANP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01884 369 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Bva13g01884 369 PANTHER ALPHABET, ISOFORM E-RELATED 3 366 - -
Bva13g01884 369 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Bva13g01884 369 Gene3D - 28 354 IPR036457 -
Bva13g01884 369 SUPERFAMILY PP2C-like 46 346 IPR036457 -
Bva13g01884 369 SMART PP2C_4 31 343 IPR001932 -
Bva13g01884 369 CDD PP2Cc 35 345 IPR001932 -
Bva13g01884 369 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 366 - -
Bva13g01884 369 Pfam Protein phosphatase 2C 66 314 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01884 Bva-Chr13 15386260 15388586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01884 1 365 PP2C-type Phosphatase Gene Family AT3G12620 66.576 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01884 K01102 - gmx:100819870 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02641 04 23359868 23362056 Bva13g01884 13 15386260 15388586 BWGD