Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01882 ATGGAAGAAATGGAAGCTATCATGGCTGCACTCTCAACTCTCACCCCTTCCCAAGTCTCCGATCTTACCCATTCCATTCTCTCCGCCACCCACCACCACCATCGCCGCCTCTCCTCCCTCCTCTCCTCCCCAACGCTCTTTTCCCTCACTCTTCATTACCTTCACTCACTATCTCTTCCACAAAAGACCCTCCTTATTGCCCGCCACCTTCTCTCGTCTCTCCACCTCCTCACCATACACTTCCAATCGGAAAAAGCTTCATCGGCGCCATCCTTGTCCACCGCCATCAGACAGCGTGAACTCGACGCCGTTTTGCTACTCCTCTTGTTCTGCGAAACCCACCAGCGCAATCCAGAAGCTATTCAAGCACCCTATTCCGATTGGCGCGTGAACTTAAGTAATCTCTTTTCTGAGACATTGTTGACGATTTCTTCTTGTAGCATTGGGACATGTACCGCCACGATTTTGATTCCTTACATTGAGATGGTGACGCGATGCTGGAGATTCATCGGGTCAATGGGATGTGAAGGTAGCGGTGGAGGAAAGGATCCGGGGGAAGTGGCGGCGGCGGTGGCGGCAGTTGTAGCGCTGCCATCGGTGGAGATGAGGATCGGCGGAAAAGAGTGTGTGATATGTAAAGAGGAGATGCGAATAGGGAGGGACGTCTGTGAGTTGCCATGTCAGCACTTGTTTCATTGGATGTGTATTTTACCGTGGCTGAGCAAGAGGAACACGTGTCCTTGCTGCAGGTTTCGGTTACCGTCGGATGATGTATTCGAAGAGATCCAACGGTTTTGGGAGATCTTGGTTAAAATGGGTGTCAGAGAGCCGTGTGATTG 839 0.5161 MEEMEAIMAALSTLTPSQVSDLTHSILSATHHHHRRLSSLLSSPTLFSLTLHYLHSLSLPQKTLLIARHLLSSLHLLTIHFQSEKASSAPSLSTAIRQRELDAVLLLLLFCETHQRNPEAIQAPYSDWRVNLSNLFSETLLTISSCSIGTCTATILIPYIEMVTRCWRFIGSMGCEGSGGGKDPGEVAAAVAAVVALPSVEMRIGGKECVICKEEMRIGRDVCELPCQHLFHWMCILPWLSKRNTCPCCRFRLPSDDVFEEIQRFWEILVKMGVREPCD 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01882 279 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 5 278 - -
Bva13g01882 279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 262 IPR013083 -
Bva13g01882 279 Pfam Ring finger domain 207 250 IPR001841 -
Bva13g01882 279 SUPERFAMILY RING/U-box 205 256 - -
Bva13g01882 279 SMART ring_2 209 249 IPR001841 -
Bva13g01882 279 ProSiteProfiles Zinc finger RING-type profile. 209 250 IPR001841 -
Bva13g01882 279 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC 5 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01882 Bva-Chr13 15378715 15379875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01882 2 271 C3H Transcription Factor Family AT5G02750 50.896 1.16e-87 261