Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01873 ATGGGAAAGGGAGGACAAGACTACGGGAAACGAGAGAACATCAGCACCAAGCCTTCCGACGCGCGAGTCTTCCCGGCGTGGGCTAAGGAAGTGCAGGAATGCGAGAAAGAGTATAACGTGAAAGTAAAAACAGGGCTAAGTACCGAACAGGTAGAGAATCAGCGCAAGATCTATGGTTTGAACGAGTTAGATAAGCACGAGGGCCAATCGATTTGGAGTTTGATACTTGATCAGTTCAACGACACCTTGGTTCGAATACTGCTTGTCGCTGCTATCGTATCCTTTGTGCTCGCTTGGTACGATGGGGACGAAGGCGGAGAGATGGAGATTACAGCTTTTGTGGAGCCTTTGgtaatatttttgattttgattgtgAATGCAACCGTGGGAGTGTGGCAAGAGAGCAATGCCGAGAAGGCACTTGAAGCGCTGAAGGAGATTCAGTCGGAGCATGCCACTGTGGTTCGTGATGgtaaaaaaattccaagtttgCCTGCGAAGGATCTTGTGCCGGGTGATATTGTTGAACTAAAGGTTGGGGATAAGGTGCCTGCTGATATGCGAGTTGTGGAATTGATTAGCTCAACTTTACGTGTTGAGCAGGGCTCATTGACTGGAGAGAGTGAAGCAGTAAATAAAAGCAACAAACCTGTTAACGAGGATGCTGATATTCAAGGAAAGAGGTCTATGGTGTTTGCGGGGACAACAGTTGTTAATGGGAATTGCATCTGCTTGGTTACTCAGACGGGCATGGAAACTGAGATTGGCAAGGTTCACGAACAGATTCATGCTGCAGCGCAAAGTGAGGAGGATACTCCATTGAAGAAGAAGCTCAATGAGTTTGGGGAGGTGCTAACTATGATAATTGGAGTAATATGTGGTCTTGTATGGCTTATCAACGTTAAGTACTTCCTTTCATGGGAATATGTAGATGGTTGGCCGAAGAACTTCAAGTTTTCATTTGAGAAGTGTACTTATTACTTTGAGATTGCAGTTGCATTGGCCGTGGCTGCAATTCCAGAAGGTTTGCCTGCAGTCATTACAACTTGCTTGGCACTAGGTACTCGCAAGATGGCTCAGAAGAATGCCTTTGTTCGAAAGCTACCGAGTGTGGAAACTCTGGGTTGTACAACTGTTATTTGTTCTGATAAAACGGGTACATTGACTACAAACCAGATGGCAGTGGCGAAGCTCGTTGCTGTGGGCTCTACGGCAGATGCACTGCGAGCCTTCAAGGTGGAAGGAACTACTTATAATCCATCTGATGGTAACATGGAGGACTGGCCAACAGGTCGATTGGATGCCAATCTTGAAACAATTGCAAAAATAGCTGCTGTCTGTAATGATGCTGGAGTCACACAGTCAGAGCATAAATTTGTCGCCCATGGGATGCCTACTGAAGCAGCCTTAAagGTTTTGGTAGAGAAGATGGGGCTTCCTGAAGGATCTCATGATTTACGATCAGCAAGCATTACTACCGTGCTACGTTGTTGCGAGTGGTGGAATGAACATGACCGTCGGATTGCTACTCTTGAGTTCGACCGTGATAGGAAGTCAATGGGTGTTATTGTGAACTCCCATCAAGGGAAGAAGTCGCTTCTTGTAAAGGGTGCTGTAGAAAATCTGTTGGAAAGAAGCTCTAAAATTCAGCTGCGTGATGGTTCTGTTGTTGAACTGGATCATAATGCTAGGAACCTTGTATTGCAAGTTCTTAATGAAATGTCAACTGGTGCATTACGCTGTTTGGGATTTGCATACAAAGATGATCTCCCTATGTTTGAAAACTACAATGGCAGTGAAGATCATCCAGCTCATCAGCTTTTGCTTGATCCTTCCAAGTATTCATCAATTGAAAGTGGACTTACTTTTGTTGGCTTGGTTGGATTGAGGgATCCTCCTCGGGAAGAAGTATACCAAGCCATTGAGGACTGCAGAGCTGCTGGAATTCGTGTTATGGTAATTACTGGAGATAACAAGAACACAGCAGAAGCTATCTGCCATGAAATTGGTGTATTCGAACCCAATGAAGATGTTAGTCGGAAAAGTATAACAGGGAAAGATTTTATGGATCTGCACGATAAAATAGGCTATCTGAGACAAAGTGGtggacttttattttctagggCTGAACCTAGGCACAAGCAAGAGATTGTGAGGTTGCTCAAAGAGGAAGGGGAGGTGGTTGCCATGACTGGAGATGGTGTGAATGATGCACCTGCCTTGAAGCTTGCTGATATTGGCATTGCAATGGGCATTGCAGGAACTGagGTGGCAAAGGAAGCTTCAGATATGGTGCTGGCAGATGATAATTTTAGTACAATTGTTGCTGCCGTTGGTGAAGGCAGATCAATCTACAATAACATGAAAGCTTTTATCAGGTATATGATATCATCCAATATTGGCGAGGTTGCATCTATATTTCTAACTGCTGCATTAGGTATTCCGGAAGGCTTGATACCTGTCCAACTTCTGTGGGTCAATCTTGTCACTGACGGACCACCTGCAACAGCTTTGGGATTCAATCCTCCTGATAAGGATATAATGAAGAAGCCTCCCCGTCGCAGTGATGATTCCCTCATCAATGCATGGATTTTGTTCCGCTATCTGGTTATTGGGATGTATGTTGGGTTAGCTACAGTTGGCATTTTCATAATATGGTATACACATGGTTCCTTCCTGGGTATTGACCTAAGCGGGGATGGCCATACTCTAGTCACATACTCCCAACTTGCCAACTGGGCTCAATGCTCCTCATGGAAGAATTTCACTGCTTCTCCCTTCACTGCCGGTGCAAGAGAAATATCTTTCGGTAACCCCTGTGACTATTTCCAGACTGGAAAAGTGAAAGCTATGACTCTCTCCCTTTCTGTCTTGGTAGCCATTGAAATGTTCAACTCCCTCAACGCCCTCTCTGAGGACGGAAGCCTTTTGTCAATGCCCCCTTGGGTCAATCCCTGGCTTCTTTTGGCGATGTCTGTGTCATTTGGTCTGCACTTCCTGATATTATACGTGCCATTTTTAGCACAGATCTTCGGCATCGTACCCCTCAGCTTCAACGAGTggcttttggttttggttgttGCGTTACCTGTTATCCTAATTGACGAGATTCTGAAATTCGTGGGGAGGTGTACAAGTAGGTCTCAAACACCAGCAGCAAGATCTAAGCAAAAATCAGAGTA 3182 0.4409 MYVGLATVGIFIIWYTHGSFLGIDLSGDGHTLVTYSQLANWAQCSSWKNFTASPFTAGAREISFGNPCDYFQTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLSMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSFNEWLLVLVVALPVILIDEILKFVGRCTSRSQTPAARSKQKSE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01873 188 Pfam Cation transporting ATPase, C-terminus 5 169 IPR006068 -
Bva13g01873 188 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 172 IPR023298 -
Bva13g01873 188 Gene3D - 1 178 - -
Bva13g01873 188 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 1 184 - -
Bva13g01873 188 PANTHER CALCIUM-TRANSPORTING ATPASE 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01873 Bva-Chr13 15336754 15343005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01873 1 186 Primary Pumps ATPases(2) AT1G07670 76.963 1.01e-101 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01873 K01537 - gmx:100788807 342.813