Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01845 ATGGCCATGAAGAGACAGAGAGAAACTGAAGCAACGGCAGAGAGCTTTGATTTGGCAAATTCTCTAATCTTGCTCTCTCAACCCAGAGAAAGCAAGCCAACCTCTGATCAAGTCTTTGAGTGCAAGACCTGCAACCGCAAGTTCTCTTCTTTCCAAGCCCTGGGTGGCCACAGGGCCAGCCACAAGAAGCCAAAGCTAAGCGGAGAAGACCTAAAAGCTGTGGCTAAGTCTCTGAGCTTGGGAAACAAACCCAAGATGCATGAATGCTCCATTTGTGGTCTCGAATTTTCTCTGGGTCAAGCACTGGGAGGCCACATGAGAAAACATAGAGATATCATGAACCAAGGGATTTCTACGATACATCAGATAAATCAGATCGCCGCTAAAGTCCCAGTTCTCAAAAGATCTAACAGTAAGAGGATTTCGTGCTTGGATCTCAACTTGACACCGTTGGAGAACGATTTGAAGTTGCTCTTTGGAGAGAGGGCACCCCAAATTCAACTTTCTTTGATGTG 515 0.4621 MAMKRQRETEATAESFDLANSLILLSQPRESKPTSDQVFECKTCNRKFSSFQALGGHRASHKKPKLSGEDLKAVAKSLSLGNKPKMHECSICGLEFSLGQALGGHMRKHRDIMNQGISTIHQINQIAAKVPVLKRSNSKRISCLDLNLTPLENDLKLLFGERAPQIQLSLM 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01845 171 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 3 165 - -
Bva13g01845 171 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Bva13g01845 171 PANTHER ZINC FINGER PROTEIN ZAT5 3 165 - -
Bva13g01845 171 SUPERFAMILY beta-beta-alpha zinc fingers 38 109 IPR036236 -
Bva13g01845 171 Pfam C2H2-type zinc finger 38 64 - -
Bva13g01845 171 Pfam C2H2-type zinc finger 87 111 - -
Bva13g01845 171 SMART c2h2final6 87 109 IPR013087 -
Bva13g01845 171 SMART c2h2final6 39 61 IPR013087 -
Bva13g01845 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Bva13g01845 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 109 IPR013087 -
Bva13g01845 171 Gene3D Classic Zinc Finger 36 109 - -
Bva13g01845 171 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01845 Bva-Chr13 15204711 15205365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01845 3 171 C2H2 Transcription Factor Family AT2G37430 48.913 1.12e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g01845 zf-C2H2_6 6.5e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01845 - - aprc:113870747 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02672 04 23485823 23486275 Bva13g01845 13 15204711 15205365 BWGD