Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01842 ATGTACGTAGAGGATACTATAGATTCTGAAAGTACTACGTCAGCCAGCAATATAAATATGGCCCTTGTGAAGTGTGCTGTTTCATTCTTGTGGCTCAAGAAAGGAAATAGTATAGGGTTGGAGATGGAGAATCAGACAAAGTATTGGTTCGACAGGTTGAAGCCCTTCATGGCTGTTGTATTCTTACAGTTTGGATTTGCAGGTTTGGATGTTATATCCAAGGCTGCACTTAACAACGGGATGAGCAATTACGTGCTTGTCGTCTATCGTCATGCTGTTGCCTTCGTTGTCATGACCCCCTTTGCAGTCATCCTGGACAAGAAAGTAAGACCCAAGATGACATTCTCCATCTTCATCAAGATAGTGATACTCAGCGTGCTAGAGCCAGTTATTGaccagaatttttattttttgggtatGAAATATACCACAGCAACATTCGCTGCTGCAATGACCAACATTCTTCCTGCGATTACCTTTGTGATGGCTTGTATACTtagGCTTGAgaagttaaaaatgaaaagcataCGCAGCCAAGCAAAGGTGTTTGGGACTCTGGCAACCGTTGCTGGAGCAATGGCTATGACGTTATTAAAAGGTCCAGCGCTTGAGTTATTTGGGACACACGGAAGCGATATCCACAAACAGCATAATGGGACAAATCTTCAACATGCAATAAAGGGATCAATCATGATCACAATTGGCTGCTTCAGTTGGGCCGCTTTTATGATTCTCCAAGCAATTACCCTTGAAACCTACCCAGCCGAGCTCTCTCTTACAGCATGGATATGCCTGCTGGGAACAGCGGAAGGCGCCATAGTGGCAGTGATTATGGAACGGGGTAACCCTTCAGTGTGGTCTCTGAATTGGGATACAAAACTTCTCGCAGCTGTCTACAGTGGTGTTATCTGTTCGGGAATGGCTTATTACATCCAAGGGGTAATTATGAAAGTTAGAGGCCCAGTGTTTGTGACAGCATTTAGTCCCCTTTGCATGGTAATTGTGGCTGTCATGAGCTCCCTCATTTTGGCCGAGCAAATGTACCTTGGAAGGGTGATTGGTGCCATTGTCATTATTTTGGGCCTGTACTTCGTGGTGTGGGGTAAAAGCAAAGATTACGGTTCATCAAGTCCAATCACCGAAGAGCATATATTGCCATCTAAGTTGATTGCAGATGAGGGCAATGCCACAAAGGAAAATTCTAATCAAAAGGTCATTGGTATCACTAATCTTGCAGCAGGAACCATGACTCGAGATGAGGAAGTCTG 1268 0.4306 MYVEDTIDSESTTSASNINMALVKCAVSFLWLKKGNSIGLEMENQTKYWFDRLKPFMAVVFLQFGFAGLDVISKAALNNGMSNYVLVVYRHAVAFVVMTPFAVILDKKVRPKMTFSIFIKIVILSVLEPVIDQNFYFLGMKYTTATFAAAMTNILPAITFVMACILRLEKLKMKSIRSQAKVFGTLATVAGAMAMTLLKGPALELFGTHGSDIHKQHNGTNLQHAIKGSIMITIGCFSWAAFMILQAITLETYPAELSLTAWICLLGTAEGAIVAVIMERGNPSVWSLNWDTKLLAAVYSGVICSGMAYYIQGVIMKVRGPVFVTAFSPLCMVIVAVMSSLILAEQMYLGRVIGAIVIILGLYFVVWGKSKDYGSSSPITEEHILPSKLIADEGNATKENSNQKVIGITNLAAGTMTRDEEV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01842 422 PANTHER WAT1-RELATED PROTEIN 49 392 - -
Bva13g01842 422 Pfam EamA-like transporter family 62 176 IPR000620 GO:0016020|GO:0016021
Bva13g01842 422 Pfam EamA-like transporter family 227 366 IPR000620 GO:0016020|GO:0016021
Bva13g01842 422 PANTHER WAT1-RELATED PROTEIN 49 392 IPR030184 GO:0016021|GO:0022857
Bva13g01842 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 370 - -
Bva13g01842 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 89 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01842 Bva-Chr13 15179388 15181758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01842 43 422 Nodulin-like Gene Family AT2G37460 60.995 1.24e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01842 - - gmx:100777050 565.844