Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01830 ATGGCGAGTTACTCCAAACCAGAGAACGCCCTGAAAAGGGCGGAAGAATTGATCAACGTAGGGCAGAAGCAGGATGCTTTGCAAACTCTTCATGACCTTATCACTTCAAAAAGATACAGAGCTTGGCAGAAGACTCTTGAAAGGATTATGTTCAAGTATGTAGAGCTTTGTGTGGAAATGCGTAAGGGTCGATTTGCAAAGGATGGACTCATCCAGTATCGTATCATATGCCAGCAAGTAAATGTTAGTTCGCTGGAGGAGGTGATCAAGCATTTCATGCATCTGTCTACTGAGAAAGCTGAGCAAGCTCGTAGCCAGGCACAAGCATTAGAAGAGGCTCTAGATGTTGATGATTTAGAGGCTGATAAAAGGCCTGAGGACTTGATGCTAAGCTATGTGAGTGGCgagaagggaaaagaaagatcTGATCGGGAACTGGTGACCCCATGGTTTAAATTTCTATGGGAAACGTACAGGACTGTGCTTGAAATATTACGAAACAATTCAAAGTTGGAAGCCCTATATGCTATGACAGCACATCGGGCTTTCCAGTTTTGCAAGCAATACAAGAGAACAACAGAGTTTCGCAGACTATGTGAAATCATAAGAAACCATCTAGCCAATCTTAATAAATATCGGGACCAAAGGGATCGACCTGATCTTTCAGCTCCGGAAAGCTTGCAACTGTATCTTGACACAAGACTTGAGCAGCTGAAAATTGCTACTGAACTTGAACTTTGGCAGGAAGCATTTCGATCAATTGAAGACATACATGGACTAATGTGCTTGGTCAAGAAAACACCAAAGCCATCATTGATGGTTGTTTACTATGCTAAACTGACAGAAGTATTTTGGATATCATCAAGCCATCTATATCATGCCTATGCATGGTTTAGGCTATTTTTGCTACAAAAGAGCTTCAATAAGAATCTGAGCCAGAAGGATTTGCAGTTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCTGTGCCTCCCTACAATCACATTCGTGGTGCATCTCATTTGGAACAGGAGcatgaaaaagagagaaacttGAGAATGGGTAATCTCATTGGGTTTAATCTTGAAACTAAATCTGACAGCAGAGAAGTGCTTTCAAGGTCATTGCTTCTCTCTGAACTGGTTTCCAAGAGTGTGATGTCTTGTGCAACTCAGGAAGTGAAGGACATATACCATCTTTTGGAACATGAATTTCTTCCCTTAGATCTTGCAGTAAAAGTACAGCCCTTGTTAGTTAAAATCTCCAAGTTAGGGGGTAAGCTTTCCACTGCTTCTTCTGTCCCAGAGATCCAGTTGTCTCAGTATATCCCAGCCCTTGAAAATCTTGCAACCTTGAGATTGCTGCAGCAGgtGTCCAATGTGTACCAGACGATGAAAATTGAGACCTTATTTGGGATGATCCCCTTCCATCAAGATTTTTCTGTTGTGGAAAAGATTTCTGTGGATGCTGTGAAGCATGATTTTGTATCTATGAAAGTTGATCACATGAGAAATGTTGTTATTTTCTGCAAGAGGAGCCTTGAGTCCGATGGTTTAAGGGAACACTTGGCTGTTTTTGctgaatatttgaataaagCAAGACAAATGATTCATCCTCCTGCTAAAAAGCCATCAAAACTTGGAGCCTTTCTTCCCAACTTGACAGAGGTTGTGGAGAAGGAACACAAGAGGCTTCTTGCCCGGAAATCAATAATTGAGAAGCggaaagaagaacaagaacgTCATCTTCTTGAAATGGAACGTGAAGAGGAGTCAAAGAGGTTAAGACTTCAGAAAATAACAGAAGAAGCAGAACAAAGAAGACTTGCCACTGAGTATGAGCAAAGGAGAAGTCAGAGGATACTCAGGGaaatagaggaaaaagaaatggaagaaaaacaagCGTTGCTTCAGGAAGCTGAAAAGCGTATTAAAACgaagaagggaaagaaacCACTCATAGAGGGAGAAAAACTGACCAAGCAAAGCTTGATGGAGTTGACTTTGACTGAGCAACTCCGAGAAAGGCAGGagatggaaaagaaactaCAAAAACTGGCAAAAACCATGGACTATTTGGAACGAGCAAAAAGAGAGGAGGCTGCTCCACTGATTGAAGCTTCATATCAAAACCGCCTTGTGGAAGAGAAGATTCTGCATGAGCATGAACAACAGCAAGAGATTAAGCTTAGCCAAGAGCGCCATGAGGGAGACCTAAGGGAGAAGAATAGGCTGGTTCGAATGATGGAAAATAAAGAGGTATATCAAGAGATGGTTGTCAGTAAGCGTCAAGCTGAATTTAACAGATTGAGGAGGGAAAGAGAGGAGCGAATCTCTAAGATTTTACATTCCAGGAGTcaagagagggaaaaactgAGGAAGTTGAAGTATTACCTCAACTTAGAAGAAGAGAGACAGCAGAGGTTGCGGGAGGAAGAGGAAGCTCGCAGGCTTGAAGAGGCGGAGAGGCGGAGGAAGGAGGAAGCTGAACGCAAAGCAAAATTGGACGAGATTGCTGAAAAGCAGAGACAAAGAGAGCTGGAGCTggaagagaaggagaagaagaggagagAGGAGATGTTTAGTCGACCTGCTGTAGCAGCATCTGCTTCTAGTGCCCCCGTCCGTCCATTAGAGGCGGGGTCTTCGGCTGCTCCTGCTGCGGCTGCTGCAGCACCATCCCAAGGGAGGTACGTCCCCAAGTTCCGGCGTGAGAACCCTGATGCTGCAGCACCGGCTGCCCCACCAGAAACGGATCGTTGGACCTCCGGCAGCAGGCCGTCCAGTGACAGGTGGCGTAGTGATGATCGCAGAAGTTCCTTTGGCACCGGTGGTGCGGGTTCAAGATCAACCTGGTCCAGGAATCGGTG 2870 0.4195 MASYSKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVEMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRLEQLKIATELELWQEAFRSIEDIHGLMCLVKKTPKPSLMVVYYAKLTEVFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPYNHIRGASHLEQEHEKERNLRMGNLIGFNLETKSDSREVLSRSLLLSELVSKSVMSCATQEVKDIYHLLEHEFLPLDLAVKVQPLLVKISKLGGKLSTASSVPEIQLSQYIPALENLATLRLLQQVSNVYQTMKIETLFGMIPFHQDFSVVEKISVDAVKHDFVSMKVDHMRNVVIFCKRSLESDGLREHLAVFAEYLNKARQMIHPPAKKPSKLGAFLPNLTEVVEKEHKRLLARKSIIEKRKEEQERHLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRRSQRILREIEEKEMEEKQALLQEAEKRIKTKKGKKPLIEGEKLTKQSLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEASYQNRLVEEKILHEHEQQQEIKLSQERHEGDLREKNRLVRMMENKEVYQEMVVSKRQAEFNRLRREREERISKILHSRSQEREKLRKLKYYLNLEEERQQRLREEEEARRLEEAERRRKEEAERKAKLDEIAEKQRQRELELEEKEKKRREEMFSRPAVAASASSAPVRPLEAGSSAAPAAAAAAPSQGRYVPKFRRENPDAAAPAAPPETDRWTSGSRPSSDRWRSDDRRSSFGTGGAGSRSTWSRNR 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01830 956 Coils Coil 798 858 - -
Bva13g01830 956 Coils Coil 669 699 - -
Bva13g01830 956 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 939 IPR027512 GO:0005852
Bva13g01830 956 Coils Coil 623 650 - -
Bva13g01830 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 908 - -
Bva13g01830 956 Gene3D - 356 493 - -
Bva13g01830 956 Gene3D - 269 343 - -
Bva13g01830 956 Pfam PCI domain 373 509 IPR000717 -
Bva13g01830 956 Gene3D UVR domain 217 268 - -
Bva13g01830 956 ProSiteProfiles PCI domain profile. 316 514 IPR000717 -
Bva13g01830 956 MobiDBLite consensus disorder prediction 941 956 - -
Bva13g01830 956 MobiDBLite consensus disorder prediction 823 862 - -
Bva13g01830 956 MobiDBLite consensus disorder prediction 924 938 - -
Bva13g01830 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 908 IPR027512 GO:0005852
Bva13g01830 956 Coils Coil 569 603 - -
Bva13g01830 956 Coils Coil 93 120 - -
Bva13g01830 956 MobiDBLite consensus disorder prediction 823 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01830 Bva-Chr13 15115203 15121037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01830 1 956 Eukaryotic Initiation Factors Gene Family AT4G11420 70.618 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01830 K03254 - gmx:100782598 1399.8