Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01820 ATGGCTTCAAGGAACAATGACCCTCAATCTAACAACGCCGACGACGACAACTGCGAtggttcattttcttatttccaaAAAACGGTTTGCTTGTATGATTGGTGGCTGATTAAAGCTGAAAATGACTTCGAAGGAAAACGATTAGCCGTTGCAGGCTTAACATCAAGAGAGCGACAAGCAGTACGTGCCTTCGTTTCTGCTCCAATTGTCAAAAGACATGACGTTTTCTCCCTGGAGACAGCTGATGGGATATGCCTTATCATCAGAGGTTTAATTAACGAGCAGCGCACCAAGGAAAATGGTTTTCCTTCTGAGtttttcaataattttctgtttggcTTTCCGCCGAACTGGTTATCTTATGCTGTAAACTACTTTGAAGGAGAATTCACTGCTGGAGATAATTCAGGAAGTATTATGACTCCTAACTGTTCACCAATTGATACGGCATTTTCTTGTAATGGCATGGAACAATCTAGTTTAACTTCTACGCTTTCTGCTTCACAAGAAGAGCCATCTGGAAATCACGAGAAGCTGCTCCCCAAAGCCAGGTTGCAGAATATTCGAACTGGTTGCCCGAAGACATCAGCTTCTGGAGGTCCTCTGAAGCATCTATATAGAGAGCAGAATCCCACATCAGAGGCAACGGAGAATCCTTGTGGAGAGAAACTGAAAAGTCTAGTGACATCTGTTGAATCACAGGTTTGCACATCGTCTAAGCAGCTTGCTGAAGGATCTGCATCTAGAAATTTGAAAACCTTGCCAGTGACTaccaaaggaaaatataagaCTAAGAGGGAGTTGGTCTTAGCTCTTTCAACTGactcgaaaagaaaaaattcaaagtctCTTTCGGCTGACTCTAAAAGGAAAACATCGAAGTCTCTTTCAGCTGACTCTAATAATGTGGGTGTAAGCCTTTCCAATCAATTTGATGATCTTGAAAAGATGAAGCATGACGatgggaaaataaatataggtggtataaatgatattaaacAGGTTTATAATCGTAAGAACATGTctttaaaacatgaaagacAAACTAGGAGCAAGACAAAATTCAAGCAGCCTCCTACTGGACTTGTGAATGCAGACACTACAAGTCAAATACGAATTGCAgttgaaaaagacaaaagcaaCTCTGACAGGGAAAGCTTGTCAGGGAAGAAAACTAGCAGgagaataaattttgatgCACATgTAACTCCTATAAAAAAGGAAGGACAGAAGAAAATTTCTACAGCTTCTCCACAGCTATCGAGTTTCAAGAGATCCAGATCAGGCAGGCTGCTTCTACCTACCATGGAGTATTGGCGCAATCAGATGCCAGTTTATGATGCGGATCGTAACATCACAGAAATTCTGGAAGGATCATCTTTGGTATCGCCAGTTAGAGGAAGTGGAACTCAACCTCAGAAAAAACTAAGGCAATA 1436 0.374 MASRNNDPQSNNADDDNCDGSFSYFQKTVCLYDWWLIKAENDFEGKRLAVAGLTSRERQAVRAFVSAPIVKRHDVFSLETADGICLIIRGLINEQRTKENGFPSEFFNNFLFGFPPNWLSYAVNYFEGEFTAGDNSGSIMTPNCSPIDTAFSCNGMEQSSLTSTLSASQEEPSGNHEKLLPKARLQNIRTGCPKTSASGGPLKHLYREQNPTSEATENPCGEKLKSLVTSVESQVCTSSKQLAEGSASRNLKTLPVTTKGKYKTKRELVLALSTDSKRKNSKSLSADSKRKTSKSLSADSNNVGVSLSNQFDDLEKMKHDDGKINIGGINDIKQVYNRKNMSLKHERQTRSKTKFKQPPTGLVNADTTSQIRIAVEKDKSNSDRESLSGKKTSRRINFDAHVTPIKKEGQKKISTASPQLSSFKRSRSGRLLLPTMEYWRNQMPVYDADRNITEILEGSSLVSPVRGSGTQPQKKLRQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01820 478 MobiDBLite consensus disorder prediction 459 478 - -
Bva13g01820 478 Pfam SANTA (SANT Associated) 29 120 IPR015216 -
Bva13g01820 478 MobiDBLite consensus disorder prediction 280 294 - -
Bva13g01820 478 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 8 294 - -
Bva13g01820 478 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 213 461 - -
Bva13g01820 478 MobiDBLite consensus disorder prediction 273 305 - -
Bva13g01820 478 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 8 294 - -
Bva13g01820 478 MobiDBLite consensus disorder prediction 463 478 - -
Bva13g01820 478 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 213 461 - -
Bva13g01820 478 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01820 Bva-Chr13 15070171 15074869 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva13g01820 SANTA 9.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01820 - - vvi:100854566 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01820 13 15070171 15074869 Bva13g01820 13 15070171 15074869 ECH