Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01816 ATGTTGACTATTGCTTTGACTCTTGCAGATGCAAAGAGGTTGATTGGTAGAAGATTCTCTGATTCCACTGTTCAAAGTGATGTTAAATTGTGGCCCTTTAAGGTCATTGCTGGCCCTGCTGACAAGCCAATGATTGTAGTTAACTACAAGGGTGAAGATAAGCAATTTGCAGCTGAAGAAATCTCTTCTATGGTACTTACTAAGATGCGTGAAATTGCGGAGGCATACCTTGGTTCGACAGTTAAGAATGCTGTTGTTACTGTGCCTGCATACTTTAATGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTCATTGCTGGCCTTAATGTCATGCGAATTATCAATGAACCTACTGCTGCTGCCATTGCTTATGGTCTTGACAAGAAGGCAACTAGTGTTGGTGAGAAGAATGTCTTGATTTTTGATCTTGGAGGTGGTACTTTTGATGTCTCTCTTCTCACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCTGGAGACACCCATCTTGGTGGTGAGGATTTTGATAACAGGATGGTAAACCACTTTGTCCAGGAGTTTAAGAGAAAGCACAAGAAGGACATAGGTGGCAACCCTAGAGCACTCAGGAGGTTGAGAACTGCTTGTGAGAGGGCAAAGCGAACTCTATCATCCACTGCTCAGACCACCATTGAGATTGATTCTCTCTACGAGGGAGTTGACTTTTACTCTCCTATTACTCGTGCCAGATTTGAGGAGCTCAACATGGACCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGTCTAAGAGATGCAAAGATGGACAAGAGGAGTGTTCATGATGTTGTCCTTGTTGGTGGTTCCACTAGAATCCCCAAGGTTCAGCAACTTTTGCAGGACTTCTTTAATGGAAAGGAGCTCTGCAAGAGCATTAATCCTGATGAGGCCGTTGCTTATGGTGCCGCTGTTCAGGCTGCTATCTTGAGTGGGGAGGGTAATGAGAAGGTCCAGGATCTTCTCCTCCTCGATGTCACGCCACTATCTCAGGGTCTGGAAACTGCTGGTGGTGTGATGACTGTGTTGATCCCCAGAAACACCACCAttccaacaaagaaagagcaagTATTCTCAACTTACTCTGATAACCAGCCTGGTGTGTTGATCCAGGTCTATGAAGGAGAGAGAACAAGGACTAGGGATAACAACTTGCTGGGGAAATTTGAATTGTCTGGCATCCCTCCTGCTCCTAGGGGTGTTCCACAAATTACTGTGTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCTGAGGATAAAACCACTGGCCAGAAGAATAAGATCACAATCACCAATGACAAGGGTAGGCTATCAAAGGAAGACATAGAGAAGATGGTTCAGGAGGCAGAGAAGTACAAGTCGGAAGACGAAGAGCACAAGAAGAAGGTTGAAGCAAAGAATGCGTTGGAGAACTACGCATACAACATGAGGAACACCGTGAGGGATGAGAAGATCGGAGGAAAACTTGATCCAGCTGATAAGAAGAAGATTGAGGATGCCATTGAACAAGCCATCCAGTGGTTAGACGGCAACCAGCTTGCAGAGGCAGATGAATTTGAGGACAAAATGAAGGAATTGGAAAGCATCTGCAACCCCATCATTGCCAAGATGTACCAGGGTGCTGGGGGTGACGCCGGTGTCCCAGTGGACGATGATGTTCCTCCTGCTAGTGGAACCGGTGCTGGCCCAAAGATTGAGGAAGTGGACTA 1760 0.4534 MLTIALTLADAKRLIGRRFSDSTVQSDVKLWPFKVIAGPADKPMIVVNYKGEDKQFAAEEISSMVLTKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDIGGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVRDEKIGGKLDPADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGDAGVPVDDDVPPASGTGAGPKIEEVD 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01816 586 Coils Coil 459 479 - -
Bva13g01816 586 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 7 566 - -
Bva13g01816 586 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 481 561 IPR029048 -
Bva13g01816 586 PRINTS 70kDa heat shock protein signature 84 104 - -
Bva13g01816 586 PRINTS 70kDa heat shock protein signature 147 157 - -
Bva13g01816 586 PRINTS 70kDa heat shock protein signature 275 291 - -
Bva13g01816 586 PRINTS 70kDa heat shock protein signature 415 431 - -
Bva13g01816 586 PRINTS 70kDa heat shock protein signature 307 327 - -
Bva13g01816 586 PRINTS 70kDa heat shock protein signature 334 353 - -
Bva13g01816 586 Gene3D - 130 304 - -
Bva13g01816 586 PANTHER HEAT SHOCK PROTEIN 70KDA 7 566 IPR013126 GO:0005524|GO:0140662
Bva13g01816 586 Pfam Hsp70 protein 5 556 IPR013126 GO:0005524|GO:0140662
Bva13g01816 586 SUPERFAMILY Actin-like ATPase domain 136 326 IPR043129 -
Bva13g01816 586 MobiDBLite consensus disorder prediction 557 586 - -
Bva13g01816 586 SUPERFAMILY Actin-like ATPase domain 6 129 IPR043129 -
Bva13g01816 586 ProSitePatterns Heat shock hsp70 proteins family signature 2. 141 154 IPR018181 -
Bva13g01816 586 Gene3D - 484 557 IPR029048 -
Bva13g01816 586 Gene3D - 7 322 - -
Bva13g01816 586 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 329 483 IPR029047 -
Bva13g01816 586 Gene3D - 9 64 - -
Bva13g01816 586 ProSitePatterns Heat shock hsp70 proteins family signature 3. 278 292 IPR018181 -
Bva13g01816 586 Gene3D Actin; Chain A, domain 4 173 256 - -
Bva13g01816 586 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 330 487 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01816 Bva-Chr13 15053224 15054984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01816 7 586 Calmodulin-binding Proteins AT3G12580 90.206 0.0 1069
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02697 04 23594496 23597575 Bva13g01816 13 15053224 15054984 BWGD
Bva13g01816 13 15053224 15054984 Bva13g01816 13 15053224 15054984 ECH
Bva13g01816 13 15053224 15054984 Bva07g02499 07 20027702 20030455 ECH