Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01809 ATGCTTAAGTCCATGGCTGGTTTCAAAACgaaggagaaggaagaagatgaaaaaggcGCCCAGCCAAACGACGTTGTTGTTGAGGATTTCAATGGAGAAAGGCAGCCAGACGACGAACGACGTTGTTTTGGAGCTGCTCTGGCCACATCACCCATTAACAATCACACCATTCAATCTTATAAAGCACAAGCTAGAGATGATggatatatctatatatatagctcaCCAGCTAGCTGGCTGGTTACCCAAATAACCATTCATCCAATCTTGTCTTTTACCTTAATTCTCCATTCAGTCATGGAGAGATCTTCTGGTGCCCAGTTAACTGCTCTTGTGGTAGACGATGACATGGTGAACCAAAAGATTCATCAGAGGCTGTTGAACAGTGTCGGAGTGAAAAATAAGACCGTGGGAAACGGCAAAGAAGCTGTAGACATTCACTGCTCTGGCCAGAGTTTCGATCTTATTCTCATGGACATGGATATGCCTATTATGAACGGAATTGAGGCAACGAAGAAACTTCGAGCAATGGGTATTCATAGCACGATTGCTGGCATCTCAACACGCTCTGTGGAAGCACAAGTAAATGAGTTTAAGGAAGCAGGTCTCGATGATTACCAAGAGAAGCCTTTGACACTTGATAAGCTCAATTCAATTCTTCACAAGATCAAGTTCAATCCtaattatta 689 0.4006 MLKSMAGFKTKEKEEDEKGAQPNDVVVEDFNGERQPDDERRCFGAALATSPINNHTIQSYKAQARDDGYIYIYSSPASWLVTQITIHPILSFTLILHSVMERSSGAQLTALVVDDDMVNQKIHQRLLNSVGVKNKTVGNGKEAVDIHCSGQSFDLILMDMDMPIMNGIEATKKLRAMGIHSTIAGISTRSVEAQVNEFKEAGLDDYQEKPLTLDKLNSILHKIKFNPNY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01809 229 CDD REC_hyHK_CKI1_RcsC-like 111 220 - -
Bva13g01809 229 MobiDBLite consensus disorder prediction 1 25 - -
Bva13g01809 229 Gene3D - 97 226 - -
Bva13g01809 229 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 101 224 - -
Bva13g01809 229 Pfam Response regulator receiver domain 111 219 IPR001789 GO:0000160
Bva13g01809 229 SMART REC_2 108 220 IPR001789 GO:0000160
Bva13g01809 229 ProSiteProfiles Response regulatory domain profile. 109 224 IPR001789 GO:0000160
Bva13g01809 229 SUPERFAMILY CheY-like 108 222 IPR011006 -
Bva13g01809 229 MobiDBLite consensus disorder prediction 1 23 - -
Bva13g01809 229 PANTHER TWO-COMPONENT RESPONSE REGULATOR 101 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01809 Bva-Chr13 15017146 15019642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01809 108 216 Response Regulator Gene Family AT3G04280 44.144 6.82e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva13g01809 Response_reg 1.1e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01809 - - rcu:8262779 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01809 13 15017146 15019642 Bva13g01809 13 15017146 15019642 ECH