Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01800 AtgGCTGTTGTTACCAATCCTGTAGTTGGGTCCCATGTTTGGGTGGAGGATCCTGATGTAGCTTGGATGGATGGTGAAGTTTTGGCAGTTAATGGAGAAGAGATCAAAGTTCTTTGTACTTCTGGGAAGACAGTTGTTGCTAAAGCTTCCAGTATTTATCCCAAAGATACTGAAGCCCCACCATGTGGAGTGGATGATATGACAAAGCTTGCTTACCTGCACGAACCTGGAGTCCTAGAGAATTTGAGATCCAGATATgatattaatgaaatatatACTTACACTGGGAATATATTGATTGCTGTGAACCCGTTCACAAAGCTACCTCATTTATATGACAGCCACATGATGGCACAATATAAAGGGGTGGCCTTCGGCGAGCTGAGTCCACATCCCTTTGCTGTTGCAGATGCGGCTTATAGGCTTATGATTAATGAGGGAATTAGTCAGTCTATACTGGTTAGTGGTGAAAGTGGTGCTGGTAAGACTGAAAGCACTAAGTTACTCATGCGTTATCTTGCTTACATGGGAGGGAGAGCAGCTGCTGAAGGTAGAACTGTTGAGCAGCAGGTCCTGGAGTCCAATCCTGTTCTAGAAGCATTTGGGAATGCAAAAACTGTCAGGAACAATAATTCAAGTCGTTTTGGAAAGTTTGTGGAGATTCAATTTGACCAACTGGGTAGAATTTCTGGAGCTGCTATCAGAACATATTTACTGGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAATTATCACTGTTTCTACATGCTGTGTGCTGCACCTTCAGAGGATATTCAGAAATACAAATTGGGAAACCCAAGAACATTCCATTATCTAAATCAATCAAATTGCTATGAGTTGGAAGGGGTTGATGATTCTAAAGAATATATTGCAACAAGGAGAGCAATGGACATTGTTGGAATAAGTTCTGAGGAGCAGGATGCAATATTCCGAGTGGTGGCTGCAATTTTGCATCTTGGAAACATTGAATTTACAAAAGGGAAGGAAATAGACTCATCTGTGCCTAAAGATGAAAAGTCACGGTTTCATCTACAAACTGCTGCGGAGCTTTTCATGTGTGATGCCAAAGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGTGATGAAACAATCACAAAATGGCTGGATCCAGAGTCTGCTGCACTCAGCCGAGATGCTTTGGCTAAAATCGTGTACTCAAGGTTGTTTGACTGGTTGGTGGAGAAAATTAATAGCTCCATTGGTCAAGACCCTGAGTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAgcaattttgtattaatttgacCAATGAAAAACTACAGCAACATTTCAATCAGCATGTTTTcaagatggagcaagaagaaTACAAAAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGTATTATTGCTCTTTTAGATGAAGCTTGTATGTTCCCTAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCCAAATTGTCACGTAGTGACTTCACAATTTGCCATTATGCTGGTGATGTTACTTATCAAACTGAATTATTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACATCAAGAACTTCTTGGTGCTTCCAAATGTCCCTTTGTATCGGGTTTGTTTCCCCCTTCTCCTGAGGAATCATCCAAACAATCAAAGTTTTCTTCGATAGGTTCTCGGTTTAAGCAACAATTACAATCATTACTTGAAACCCTCAGTTCCACAGAGCCTCACTACATGCGTTGTGTAAAACCCAATAATTTACTAAAGCCAGCTATCTTTGAGAACAAAAATGTTCTGCAGCAACTACGTTGTGGGGGAGTCATGGAGGCAATCAGGATAAGTTGTGCAGGATATCCTACCAGAAAACCCTTTGAGGAATTTGCGGAAAGATTTGGACTTCTTGCACCTGAAGCTTTGGATGGAAGTCCTGATGAGATCACTGCCTGTAAGAGGATTTTAGAGAAGGTTGGACTTAAAGGTTATCAGATTGGGAAAACCAAGGTGTTTCTTCGAGCTGGCCAAATGGCAGATCTAGACACCCGTAGGAGTGAGGTCTTAGGAAAGTCAGCGAGCATTATTCAGAGAAAAGTTCGTTCCTATTTGGGCCGCCGAAACTTTGTCTTGCTTCGTTTGTCTGCTATCCAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTATGAAGGAATGCAGCGGGAGGCTTCTAGTCTGATGATTCAAAGGTGTCTCCGCATGCATATTGCCAGGAAGGCATACAAAGAATTGTACACCTCTGCTGTTGCTGTTCAGACTGGTATGCGTGGAATGGCTGCTCGTATTGAGCTACACTTTAGGAGTCGGACTAAAGCAGCAACTGTTATTCAGAGCTATTGCCGGAAATACTTTGCACGACTTCATTTTATGAGGATAAAGAAAGCAGCTATTACAACACAATGTGCATGGAGAGGAAGAGTTGCTCGGCGAGAGTTGCGTAAGCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTGGAAGATCTTACATTGAGATTACAGCTAGAGAAGCGCTTGAGGGCTGACATGGAAGAAgcaaaaacacaagaaaatcaGAAATTGCAGTCTGCTTTGCAAGAGATGCAATTGCAgttcaaagaaacaaaaatactgCTTGAAAAGGAGCGTGAGAATGCAAAAATGGTAGCAGAGATAGTGCCTGTCATACAAGAGGTTCCAGTTGTTGACCATGCATTGTTGGAAAAGCTTCTTGGTGAAAATGAGAAACTTAAGACCTTGGTGAGTTcactggaaaagaaaattgatgaaacagAAAGTAGGTACGAAGAGGCAAGCAGAATCAGTGAAGAGAGGTTGAAGCAAGCTTTGGATGcagaatcaaaaataattcagTTGAAGACCACCATGCAAAGGCTTGAAGAGAAATTCTCAGACATTGAATCTGAAAACCAGATTCTTCAGCAACAATCTCTGCCGAACTCATCTGTGAAAAAGATGTCAGAGCACCTCTTATCCCCTGTGATTGAGAAGTTGGAAAATGGTCACCATCTGATGGAGGAGCGTGGAGCTGTTAATGTAACACCTGTGAAGAAGTTTGCTTCAGAATCTGATAGCAAATTTAGGAGATCGAACATAGAACGTCAACATGAGAATGTTGATGCCCTTATCAACTGTGTTAAGGAAAACATTGGGTTCAGTAATGGAAAGCCTGTTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGGACAAGTGTATTTGATCGCCTCATCCAAATGATTGGTTCTGCAATCGAGAATCAAGAAGACAATGATCTTATGGCCTATTGGCTCTCAAATACATCTGCATTATTGTTTTTGCTTCAACAAAGTCTGAAATCTGGTGGTTCAAGTGACACAACCCCAGCTAAAAAACCACCTGCTCCAACGTCCCTCTTTGGAAGAATGACTATGGGTTTCCGTTCGTCCCCATCCTCTGCCAATCTTCCTGCACCTGCATTGGAGGTTGTACGCAAGGTTGAGGCCAAGTATCCAGCTTTGCTTTTCAAGCAGCAGCTCACAGCCTTTGTGGAGAAAATATACGGCATCATTCGGGACAACTTGAAGAAGGATTTAGGATCGTCTCTTTCATCATGTATCCAGGCACCGAGAGCATTGAAGACAGGATTAAGATCTGGCCGATCCTTTGGTAAAGATTCTCCAACAGGTCATTGGCAGAATATTATTGAAAGCCTCAACACTCTCCTCTGTACACTGAAAGAGAACTTTGTTCCTTCAGTCCTTATCCAAAAGATATACACTCAAACATTCTCATATATTAATGTACAACTCTTCAATAGTCTTCTCCTGCGTCGTGATTGTTGCACATTCAGCAATGGGGAATACGTGAAAGCTGGATTAGCAGAATTGGAGCTCTGGTGCTGCCAAGCAAAGGAGGAGTATGCAGGGTCATCCTGGGATGAGCTTAAGCACATAAGACAGGCTGTTGGGTTTTTGGTTATTCATCAGAAGTACAGGATATCCTATGATGAAATTACCAATGATTTATGTCCTATTCTAAGTGTCCAGCAGCTGTATAGAATATGTACACTCTACTGGGACGATAGCTACAACACTCGAAGTGTATCTCCAGACGTCATTTCGAGCATGAAGGTGCTTATGACTGAGGACTCTAATAATGCTCAGGGTGATTCTTTCTTGTTGGATGATAACTCCAGCATCCCCTTCTCAGTGGATGACCTTTCTTCATCATTGCAAGAGAAGGATTTCTCTGACGTTAAACCAGCAGAAGAACTTCTTGAGAATCCAGCCTTCCAGTTTTTACATGAGTA 4529 0.4076 MAVVTNPVVGSHVWVEDPDVAWMDGEVLAVNGEEIKVLCTSGKTVVAKASSIYPKDTEAPPCGVDDMTKLAYLHEPGVLENLRSRYDINEIYTYTGNILIAVNPFTKLPHLYDSHMMAQYKGVAFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQLGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPSEDIQKYKLGNPRTFHYLNQSNCYELEGVDDSKEYIATRRAMDIVGISSEEQDAIFRVVAAILHLGNIEFTKGKEIDSSVPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPESAALSRDALAKIVYSRLFDWLVEKINSSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQELLGASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSSTEPHYMRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFEEFAERFGLLAPEALDGSPDEITACKRILEKVGLKGYQIGKTKVFLRAGQMADLDTRRSEVLGKSASIIQRKVRSYLGRRNFVLLRLSAIQIQAACRGQLARQVYEGMQREASSLMIQRCLRMHIARKAYKELYTSAVAVQTGMRGMAARIELHFRSRTKAATVIQSYCRKYFARLHFMRIKKAAITTQCAWRGRVARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRADMEEAKTQENQKLQSALQEMQLQFKETKILLEKERENAKMVAEIVPVIQEVPVVDHALLEKLLGENEKLKTLVSSLEKKIDETESRYEEASRISEERLKQALDAESKIIQLKTTMQRLEEKFSDIESENQILQQQSLPNSSVKKMSEHLLSPVIEKLENGHHLMEERGAVNVTPVKKFASESDSKFRRSNIERQHENVDALINCVKENIGFSNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQEDNDLMAYWLSNTSALLFLLQQSLKSGGSSDTTPAKKPPAPTSLFGRMTMGFRSSPSSANLPAPALEVVRKVEAKYPALLFKQQLTAFVEKIYGIIRDNLKKDLGSSLSSCIQAPRALKTGLRSGRSFGKDSPTGHWQNIIESLNTLLCTLKENFVPSVLIQKIYTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDSYNTRSVSPDVISSMKVLMTEDSNNAQGDSFLLDDNSSIPFSVDDLSSSLQEKDFSDVKPAEELLENPAFQFLHE 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01800 1509 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 Gene3D - 666 733 - -
Bva13g01800 1509 SMART DIL_2 1330 1437 IPR002710 -
Bva13g01800 1509 Coils Coil 972 1006 - -
Bva13g01800 1509 CDD MYSc_Myo11 76 720 IPR036018 -
Bva13g01800 1509 Gene3D Kinesin motor domain 65 662 IPR036961 -
Bva13g01800 1509 Pfam IQ calmodulin-binding motif 832 851 IPR000048 GO:0005515
Bva13g01800 1509 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Bva13g01800 1509 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515
Bva13g01800 1509 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Bva13g01800 1509 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Bva13g01800 1509 Gene3D - 439 623 - -
Bva13g01800 1509 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Bva13g01800 1509 Coils Coil 1014 1048 - -
Bva13g01800 1509 Gene3D - 833 882 - -
Bva13g01800 1509 Gene3D - 734 784 - -
Bva13g01800 1509 Gene3D - 785 832 - -
Bva13g01800 1509 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Bva13g01800 1509 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 883 IPR027417 -
Bva13g01800 1509 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Bva13g01800 1509 PANTHER MYOSIN 6 1507 - -
Bva13g01800 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Bva13g01800 1509 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Bva13g01800 1509 Coils Coil 877 950 - -
Bva13g01800 1509 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 Gene3D - 252 310 - -
Bva13g01800 1509 ProSiteProfiles Dilute domain profile. 1154 1455 IPR002710 -
Bva13g01800 1509 Pfam DIL domain 1331 1434 IPR002710 -
Bva13g01800 1509 SMART iq_5 782 804 IPR000048 GO:0005515
Bva13g01800 1509 SMART iq_5 853 875 IPR000048 GO:0005515
Bva13g01800 1509 SMART iq_5 830 852 IPR000048 GO:0005515
Bva13g01800 1509 SMART iq_5 734 756 IPR000048 GO:0005515
Bva13g01800 1509 SMART iq_5 757 779 IPR000048 GO:0005515
Bva13g01800 1509 PANTHER MYOSIN-14 6 1507 - -
Bva13g01800 1509 CDD MyosinXI_CBD 1105 1478 IPR037975 GO:0007015
Bva13g01800 1509 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva13g01800 1509 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01800 Bva-Chr13 14924405 14944164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01800 1 1508 Myosins gene family AT5G43900 76.187 0.0 2390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01800 K10357 - gmx:100786893 2618.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01800 13 14924405 14944164 Bva04g02712 04 23684888 23698586 BWGD
Bva13g01800 13 14924405 14944164 Bva13g01800 13 14924405 14944164 ECH