Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01795 ATGCTTCAACATTTGAGCTTCCGAAACAACACTTTCAGTGGCTCTATTCCTCCATCTATATCCAACTTGTCAGTGCTACAGACCTTGGATTGGAATTACAATCTCATCACTGGAAGCATTCCTCTGGAGATTGGTCAACTTCGCCGCTTGAAGATTTTACGTATTGCATATAATAAGCTTTCAGGAGCCATACCTCCAACAATTTCCAACATATCTTCACTTGAATTATTAAGTTTGCCTGGAAATTCATTATCAGAGTATGGATCAGAGGGAATTGTTTCTGTTAAAGGAGATGTGTATAGCTATGGGATTATGTTGATGGAAATATtcacaagaaagaaaccaaCAGATGAGATGTTTGAAGATGGATCCAGCCTGAAAAGTTGGGTTAGTGAATCAATGCCCCATGCAATGATACATGTTGTTGATTCTACTTTGCTACAGCTAGAGGGGCGACAAATTGACAATATAATGGCATATGCATCATCTATTCTGAAGTTAGCCTTGAATTGTTGCAAAACTTTGCCTGAATCACGGATTAATATGCTGGATGTTGTtgcttcattaaaaaaaatcaggaTTAGGTTCATGCAAAATGCAAGGGCTACGtg 611 0.3617 MLQHLSFRNNTFSGSIPPSISNLSVLQTLDWNYNLITGSIPLEIGQLRRLKILRIAYNKLSGAIPPTISNISSLELLSLPGNSLSEYGSEGIVSVKGDVYSYGIMLMEIFTRKKPTDEMFEDGSSLKSWVSESMPHAMIHVVDSTLLQLEGRQIDNIMAYASSILKLALNCCKTLPESRINMLDVVASLKKIRIRFMQNARAT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01795 203 Gene3D Transferase(Phosphotransferase) domain 1 88 203 - -
Bva13g01795 203 Gene3D Ribonuclease Inhibitor 1 87 IPR032675 -
Bva13g01795 203 Pfam Protein tyrosine and serine/threonine kinase 89 188 IPR001245 GO:0004672|GO:0006468
Bva13g01795 203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 86 198 - -
Bva13g01795 203 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 85 - -
Bva13g01795 203 Pfam Leucine Rich Repeat 2 23 IPR001611 GO:0005515
Bva13g01795 203 SUPERFAMILY L domain-like 2 88 - -
Bva13g01795 203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 86 198 - -
Bva13g01795 203 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 85 - -
Bva13g01795 203 SUPERFAMILY Protein kinase-like (PK-like) 86 196 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01795 Bva-Chr13 14787199 14796132 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01795 2 97 Receptor kinase-like Gene Family AT3G47570 36.458 1.46e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva13g01795 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01795 - K13420 pvy:116142593 154.066