Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01790 ATGCTGGAGTACGGATCAGAGGGAATTATTTCTGTTAAAGGAGATGTGTATAGTTATGGGATTATGTTGATGGAAATGTtcacaagaaagaaaccaaCAGATGAGATGTTTGAAGATGAATCCAGCTTGAAAAGTTGGGTTAGTGAATCAATGCCCCATGCAATAATACATGTTGTTGATTCTACTTTGCTGCAGCTAGAGGGACAACAAATTGACAATATAATGGCACATGCATCATCTATTCTGAAGTTAGCCTTGAATTGTTGCAAAAATTTACCTGAATCACGGATCAATATGTTGGATGTTGTTGCTTCATTGAAAAAAGTCAGGATTAGGTTCATGCAAAATGCAAGGGCGACGtg 362 0.3564 MLEYGSEGIISVKGDVYSYGIMLMEMFTRKKPTDEMFEDESSLKSWVSESMPHAIIHVVDSTLLQLEGQQIDNIMAHASSILKLALNCCKNLPESRINMLDVVASLKKVRIRFMQNARAT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01790 120 Pfam Protein tyrosine and serine/threonine kinase 4 105 IPR001245 GO:0004672|GO:0006468
Bva13g01790 120 Gene3D Transferase(Phosphotransferase) domain 1 2 111 - -
Bva13g01790 120 SUPERFAMILY Protein kinase-like (PK-like) 3 113 IPR011009 -
Bva13g01790 120 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 3 116 - -
Bva13g01790 120 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01790 Bva-Chr13 14550572 14551699 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01790 3 120 Receptor kinase-like Gene Family AT3G47570 35.593 9.50e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva13g01790 PK_Tyr_Ser-Thr 2.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01790 - K13420 mtr:MTR_8g469860 150.984