Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01782 ATGGCTGGGTTCAGCGGCGATGAGACAGCACCGTTCTTCGGCTTCCTTGGAGCCGCAGCAGCTCTTGTTTTCTCGTGTATGGGAGCTGCCTATGGTACTGCAAAGAGTGGTGTGGGTGTGGCTTCAATGGGTGTGATGAGACCTGAGCTTGTTATGAAGTCAATTGTCCCAGTTGTTATGGCTGGAGTTTTGGGTATTTATGGTCTTATTATTGCTGTCATTATTAGTACTGGAATCAATCCAAAGGCCAAATCTTACTACCTCTTTGATGGTTATGCGCATCTCTCTTCTGGACTTGCCTGTGGGCTTGCTGGGCTTTCTGCTGGTATGGCTATTGGTATTGTTGGCGATGCTGGTGTTAGAGCTAATGCACAGCAGCCCAAACTTTTTGTCGGAATGATTCTTATCCTCATTTTTGCTGAAGCTCTTGCCCTATATGGTCTCATTGTTGGTATCATCCTCTCTTCTCGTGCTGGCCAGTCCAGAGCCGAGTA 494 0.4757 MAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01782 164 CDD ATP-synt_Vo_c_ATP6C_rpt2 88 155 - -
Bva13g01782 164 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Bva13g01782 164 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Bva13g01782 164 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 164 - -
Bva13g01782 164 SUPERFAMILY F1F0 ATP synthase subunit C 12 76 IPR035921 -
Bva13g01782 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bva13g01782 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bva13g01782 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 132 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bva13g01782 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 133 156 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bva13g01782 164 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 164 - -
Bva13g01782 164 SUPERFAMILY F1F0 ATP synthase subunit C 86 155 IPR035921 -
Bva13g01782 164 Gene3D - 10 161 IPR035921 -
Bva13g01782 164 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bva13g01782 164 Pfam ATP synthase subunit C 96 154 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01782 Bva-Chr13 14390483 14392460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01782 1 164 Primary Pumps ATPases(2) AT2G16510 98.780 2.49e-111 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01782 K02155 - gmx:100777816 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01782 13 14390483 14392460 Bva13g01782 13 14390483 14392460 ECH