Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01771 aTGCGAACGCTTTGCGACGTGTGTGAGAGTGCCGCTGCAATCCTCTTCTGCGCCGCCGACGAGGCTGCTCTTTGCCGTGCATGCGACGAAAAGGTCCATATGTGTAACAAACTTGCAAGTAGGCATGTGCGGGTTGGGCTTGCTGCCCCCACCGATGTTCCACGCTGTGACATATGTGAAAATGCACCTGCTTTCTTTTACTGTGAGATAGACGGCAGTTCACTGTGTCTGCAATGCGATATGATTGTACATGTTGGTGGTAAAAGAACACATGAAAGATATCTTCTACTGAGACAGAGAGTTGAGTTTCCAGGTGACAAACATGGCAGATTGGACGAACTAGGGCTTCAACTTGCTgatcaaaaagaattaaagatgGACCAAAGTCAGCCTCTTAAGCTAAAAACAAGAGATGGTCAGCAGAATCACAGAGGCTCAACTGTTCCGAtgctagaaaataatattgatgGTCAcggaaaaatggaaaaaaatctAATCGATCTAAATACTAGGCCACAGCGGTTAAACGGACCAACATCAAACAACCAGGAACATGGTATGTATATTTCAAGTGGCAATAAGAATGAATCTACAAGTGTTGTACCAGTAGAATCCTTCAAAAGAGAGCCTGAGAAGTA 638 0.4169 MRTLCDVCESAAAILFCAADEAALCRACDEKVHMCNKLASRHVRVGLAAPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRVEFPGDKHGRLDELGLQLADQKELKMDQSQPLKLKTRDGQQNHRGSTVPMLENNIDGHGKMEKNLIDLNTRPQRLNGPTSNNQEHGMYISSGNKNESTSVVPVESFKREPEK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01771 212 MobiDBLite consensus disorder prediction 127 157 - -
Bva13g01771 212 CDD Bbox1_BBX-like 4 47 - -
Bva13g01771 212 MobiDBLite consensus disorder prediction 171 212 - -
Bva13g01771 212 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Bva13g01771 212 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 212 - -
Bva13g01771 212 Gene3D Classic Zinc Finger 2 95 - -
Bva13g01771 212 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva13g01771 212 CDD Bbox1_BBX-like 56 96 - -
Bva13g01771 212 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bva13g01771 212 SMART bboxneu5 51 96 IPR000315 GO:0008270
Bva13g01771 212 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 212 - -
Bva13g01771 212 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Bva13g01771 212 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Bva13g01771 212 MobiDBLite consensus disorder prediction 171 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01771 Bva-Chr13 14314598 14317677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01771 1 212 C2C2-CO-like Transcription Factor Family AT4G38960 60.377 2.99e-85 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bva13g01771 zf-B_box 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01771 - - gmx:100818604 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01771 13 14314598 14317677 Bva13g01771 13 14314598 14317677 ECH
Bva06g01945 06 13161996 13163103 Bva13g01771 13 14314598 14317677 ECH
Bva10g00876 10 6701985 6703454 Bva13g01771 13 14314598 14317677 ECH