Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01761 ATGAAGATCCAATGTGATGCTTGTGGCAAAGAAGTGGCCTCCGTTTTCTGTCCTGCAGATGAAGCTGCACTCTGCCATGGCTGCGATACCAGCATTCACCGTGCCAACAAGCTCGCAGGCAAACACACCCGCTTCTCCCTTCACCGCCCCACTTCTAAAGAAACCCCTCTTTGCGATATCTGTCAAGAGAAGAGAGCAATTCTGTTTTGCCAAGAAGACAGAGCAATACTTTGCAGAGAATGCGACATTCCAATCCACAGAGCCAATGAACTTACCCAGAAACACAATAGGTTTCTTCTCACAGGCTCGAAGATCtctggtttttctttgaaCCTAGCTTCATCGTCTTCCAATGGCGCCAATGCAGTCACTGATGGTGATGATATAAGGAGAACCAgatcaaaatttaatgaagATTTCTGTTCTCCTTCAATGGGAAATTCAATGGCGTCTGCAGCTGCTTGCAAGGTTGAAGACAGTGACACGGGTTCAGCTTCAACAAGCAGCTTTTCTGCATACTTGACTGAGTCGATACCTGGCTATTGCTTTGAAGACCTTCTTGATGCTTCATATACTCCTGATGGTTTCTGTAAGAATTTTGAGCTTGAACCAGAATTCCAAGAGCAAGAACTTGGAGCAAGCATGCTTTTGCTTCCATCAGAAGTTTTGGCAGCCTGGGTACCTCAAGCTCAATCACCTCAACTTAGTGCTTCAACTCTTGCCCAGATTGGTTCTCTggtaaaaattaaggaaactCCACAAGCAAACACTGCAAAGGGAAATTGGAAATGGAGAGATAATGGTCATACAGTTCCTCAAGTGAAACAAGCTAAACGCTCTCGATA 845 0.4308 MKIQCDACGKEVASVFCPADEAALCHGCDTSIHRANKLAGKHTRFSLHRPTSKETPLCDICQEKRAILFCQEDRAILCRECDIPIHRANELTQKHNRFLLTGSKISGFSLNLASSSSNGANAVTDGDDIRRTRSKFNEDFCSPSMGNSMASAAACKVEDSDTGSASTSSFSAYLTESIPGYCFEDLLDASYTPDGFCKNFELEPEFQEQELGASMLLLPSEVLAAWVPQAQSPQLSASTLAQIGSLVKIKETPQANTAKGNWKWRDNGHTVPQVKQAKRSR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01761 281 Pfam B-box zinc finger 55 96 IPR000315 GO:0008270
Bva13g01761 281 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bva13g01761 281 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 281 - -
Bva13g01761 281 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bva13g01761 281 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bva13g01761 281 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bva13g01761 281 CDD Bbox1_BBX-like 57 100 - -
Bva13g01761 281 MobiDBLite consensus disorder prediction 257 281 - -
Bva13g01761 281 Gene3D Classic Zinc Finger 1 95 - -
Bva13g01761 281 CDD Bbox1_BBX-like 5 47 - -
Bva13g01761 281 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva13g01761 281 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01761 Bva-Chr13 14210098 14212080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01761 1 274 C2C2-CO-like Transcription Factor Family AT1G75540 38.170 2.52e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bva13g01761 zf-B_box 7.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01761 - - gmx:100790232 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01761 13 14210098 14212080 Bva13g01761 13 14210098 14212080 ECH
Bva13g01761 13 14210098 14212080 Bva08g00825 08 4241202 4243920 ECH