Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01756 ATGGGAGAGGTAGCGCGTGGAGGTTGTTGTCCACCGATGGATCTGTTCCGCTCGGAGCCGATGCAGCTGGTTCAGCTCATCATCCCCATGGAGTCCGCTCACCTCACCGTCTCCTACCTCGGCGACCTTGGACTGGTTCAGTTCAAAGATCTCAATGCAGAGAAGAGCCCTTTCCAACGGACTTATGCAACTCAGATAAAACGATGTGGTGAGATGGCACGGAAATTGCGATTCTTCAGGGATCAAATGTCGAAGGCAGGTGTACTGCCAACAGGATCTGCAACACAAGGTCATTTGAACATTGATGACTTAGAGGTAAAACTTGCAGAACTTGAATCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAGCGGTCATATAATGAACTTGTGGAATATAAACTTGTCCTGCAGAAGGCTGGTGATTTTTTCCACTCAGCTCAAAGCAGTGCCATTGAGCAAGAGAGAGAATATGAATCACGCCATTTAAGTGGAGAATCTGTGGAAACACCTCTATTGCGGGACCATGAATTGTCAACTGATTCATCCAAGCAAGTTAAGTTGGGGTTTCTCACTGGCCTAGTTCCCAGGGAAAAGTCCATGACATttgagagaattttatttCGTGCTACTAGGGGCAACGTGTTTCTTAGGCAGGCTGTTGTTCAGGATCCTGTCACAGACCCTGTCTCTGGAGAAAAGATTGAGAAAAATGTGTTTGTAGCATTTTACTCTGgtgaaaaagcaaaagccaAGATTCTGAAAATATGTGATGCCTTCGGTGCAAATCGTTACCCTTTTACTGAAGAACTAGGAAAACAGGCTCAAATGGTTGTAGAGGTTTCTGGAAGAATCTCTGAGTTGAAAACAACCATAGATGCTGGATTGTTGCAACGGGATATCTTGCTAAAGACTATTGGGGCTCAATTTGAGCAATGGAATCTTTTGGTAAGGAAGGAGAAATCCATATACCATACTCTGAATATGCTTAGCCTTGATGTGACCAAAAAATGTCTAGTGGCTGAGGGATGGAGTCCTGTTTTTGCTGCAAAGCAgATACAGGATGCGTTGCACCGGGCAAGATTTGACTCCAACTCCCAAGTTGGTTCCATTTTCCAAGTTTTGCTAACGAGGGAGTCCCCACCTACATTCTTTTGTACAAACAAATTCACTTCTTCATTTCAGTCTATTGTTGATGCATATGGGGTGGCTAAGTATCAAGAGGCAAACCCTGCTGTATATACCATAGTTacctttccatttctttttgccGTAATGTTTGGTGATTGGGGGCATGGAATATGTCTACTGCTGGCCAGtttgtatttcattttcagaGAGAAGAAACTTTCTAGCCAGAAGCTGGGAGACATCCTTGAGATGACTTTTGGTGGTCGTTATGTTATTTTGATGATGTCACTCTTATCGATCTTCACTGGTTTGATCTATAATGAGTTCTTCTCTGTCCCATTTGCATTTTTTGGTCCCTCAGCATATGAATGTCGTGATCTCTCTTGCAGAGATGCTACTACAGAGGGCCTGATAAAAGTGCGTCGTACATACCCATTTGGAGTGGATCCTGTGTGGCATGGTTCACGAAGCGAATTGCCATTCCTAAACtcactgaaaatgaaaatgtcaatTCTGCTTGGGATTGCCCAAATGAACCTTGGAATTATTATAAGCTATTTTAATGCGAAATTTTTTGGAAACGGCCTGAACATATGGTTCCAATTTATTCCCCAAATGATATTTCTCAATGCTCTCTTTGGCTACCTTTCCCTACTTATCATTGTGAAGTGGGTCACTGGCTCAACGGCTGATTTGTACCACATAATGATCTACATGTTTCTAAGTCCTACAGATGAGTTGGGTGAAAACCAGCTATTTGTTGGCCAGAAAACTCTGCAGCTTGTGCTACTAGTTCTAGCCCTTGTCTCTGTGCCCTGGATGCTGATCCCAAAACCCTTTCTTTTGAAGAAGCAACACGAAGATAGGCACCGTGGTGAATCCTATGCACCACTTCAAAGTACTGAAGAAAGCTTGCAGCTGGAGTCAAATCGTGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTTTTTGTGCATCAACTCATTCATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCATACCTTCGTCTTTGGGCACTTAGtcTTGCTCATTCGGAGCTATCAAGTGTATTCTATGATAAGGTTCTCCTTCTTGCATGGGGGTACAACAATGTGATCATCCTTATAGTGGGTATCATCGTCTTCGTCTTCGCTACCGTTGGAGTATTGCTGGTCATGGAAACTCTCAGTGCCTTCCTGCATGCTCTGCGTCTTCACTGGGTGGAGTTCCAGAACAAGTTCTATGAGGGAGATGGTTATATGTTCTATCCTTTCTCCTTTGCATTGCTTGATGATGAGGAAGAATG 2459 0.4201 MGEVARGGCCPPMDLFRSEPMQLVQLIIPMESAHLTVSYLGDLGLVQFKDLNAEKSPFQRTYATQIKRCGEMARKLRFFRDQMSKAGVLPTGSATQGHLNIDDLEVKLAELESELTEMNANGEKLQRSYNELVEYKLVLQKAGDFFHSAQSSAIEQEREYESRHLSGESVETPLLRDHELSTDSSKQVKLGFLTGLVPREKSMTFERILFRATRGNVFLRQAVVQDPVTDPVSGEKIEKNVFVAFYSGEKAKAKILKICDAFGANRYPFTEELGKQAQMVVEVSGRISELKTTIDAGLLQRDILLKTIGAQFEQWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFAAKQIQDALHRARFDSNSQVGSIFQVLLTRESPPTFFCTNKFTSSFQSIVDAYGVAKYQEANPAVYTIVTFPFLFAVMFGDWGHGICLLLASLYFIFREKKLSSQKLGDILEMTFGGRYVILMMSLLSIFTGLIYNEFFSVPFAFFGPSAYECRDLSCRDATTEGLIKVRRTYPFGVDPVWHGSRSELPFLNSLKMKMSILLGIAQMNLGIIISYFNAKFFGNGLNIWFQFIPQMIFLNALFGYLSLLIIVKWVTGSTADLYHIMIYMFLSPTDELGENQLFVGQKTLQLVLLVLALVSVPWMLIPKPFLLKKQHEDRHRGESYAPLQSTEESLQLESNRDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGYNNVIILIVGIIVFVFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYMFYPFSFALLDDEEE 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01756 819 PIRSF ATP6V0A1 11 819 IPR026028 GO:0000220|GO:0046961
Bva13g01756 819 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 5 819 - -
Bva13g01756 819 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bva13g01756 819 PANTHER VACUOLAR PROTON ATPASES 5 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bva13g01756 819 Coils Coil 94 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01756 Bva-Chr13 14169447 14179373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01756 13 819 Primary Pumps ATPases(2) AT4G39080 79.506 0.0 1326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01756 K02154 - gmx:100810062 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01756 13 14169447 14179373 Bva13g01756 13 14169447 14179373 ECH