Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01749 ATGGAGGAGGATGATGAGATTCAAGCACAGGCATGTAGATTCCCAAGAGTTGGCAATGGAAGAAATGAGACTAACAAGATAGGCTCTAGAGGGAACAATGAGCAATACCCagatgaggaagaagatggagaACTTAGAAGAAGAGGTGGTGGAGGCAGTGATGGAAGCACAAATCGGTTCCATTGGCACCATTCTTCAAGAATCATTAGGGTTTCAAGAGCATCTGGGGGAAAAGATAGGCACAGCAAGGTCATGACTTCAAAGGGTTTGAGAGACAGAAGGGTTAGGCTCTCAGTGACTACAGCTATTCAGTTCTATGATCTTCAAGATCGGCTTGGTTATGACCAACCCAGTAAAGCTGTGGAATGGCTGATTAAAGCAGCAGCAGATGCCATTTCTGAGCTCCCTTCTCTGAACAATACTTTCCCGGATACCCCTAAGCAACCAAGCGATGAGAAAAGGGCAAGTGTGGGAACAGAACAAGGCTTTGATTCTGCTGACGCCGAGCTAGATGGCGAGGGCAATTATCAGCAGAATCAAAGCCAGAACCTTTCCTTGTCTAAATCTGCTTGTAGCAGCACCTCGGAGACGAGTAAAGGTTCTGGCTTGTCCCTCTCAAGGTCTGAAATTCGCGTGAACCGGAACAAGGCTCGTGAGAGGGCTAAGGTGAGAgtgaaggagaaggagaaggattcTCTCATTGCCCATCACCAAAATGTGAATGCCATTTCCCAAACTGCTTCTTTTACTGAGCTTTTAACTGGTGGGATTGGCAATGTTGCTACAACAACTGCAAGCCCAACTGGTTCAGCTCACCAGAATCACCAAGAAGAGCctaattttttcaacaaaggGGGGAGACAGCCATGGCCTTCAACAGTTCCAATGGACAATTTCGGCTCAGGGCCTCTAGGgccatcatcatcttcttcaagGACCcagcatcatcatcatcatcatcaatcttcatcttcttctgggTTCTCAGGGCAAATCCAATTGGGAAACTCTTCTCTTCCCCAAGCTATGTCGGTTTCACCCTTCAATGTCACAGGTGAAAACCACTCTGATCAGCTGCAGCATTTCTCCCTCATCCCTGACCATCTTATACCAGTGGTCACTTCTCAACCCAGCGGGAGCGACTACAATCTAAATTTTACCATCTCAACTTCAGGCCTTGCTGGCTACCACAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTTTGCCTCACCTGCAGAGGTTTTCGCCTATAGACGGAAACAATGTACCTTTCTTCATAGGAGCAggagcagcagcagcagcttcAGCTGCTCCCACCATGGAGAATCACCACCATCATCAGTTCTCGCCTGGATTTGATGGCCGCTTACAACTCTGCTACAGCGACGGAAGCCGGCATCCAGACCACAAGGGCAAAGGAAAGAACTG 1430 0.4364 MEEDDEIQAQACRFPRVGNGRNETNKIGSRGNNEQYPDEEEDGELRRRGGGGSDGSTNRFHWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAISELPSLNNTFPDTPKQPSDEKRASVGTEQGFDSADAELDGEGNYQQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRNKARERAKVRVKEKEKDSLIAHHQNVNAISQTASFTELLTGGIGNVATTTASPTGSAHQNHQEEPNFFNKGGRQPWPSTVPMDNFGSGPLGPSSSSSRTQHHHHHHQSSSSSGFSGQIQLGNSSLPQAMSVSPFNVTGENHSDQLQHFSLIPDHLIPVVTSQPSGSDYNLNFTISTSGLAGYHRGTLQSNSPSLLPHLQRFSPIDGNNVPFFIGAGAAAAASAAPTMENHHHHQFSPGFDGRLQLCYSDGSRHPDHKGKGKN 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01749 476 ProSiteProfiles TCP domain profile. 77 135 IPR017887 -
Bva13g01749 476 PANTHER TRANSCRIPTION FACTOR TCP24 1 476 - -
Bva13g01749 476 Pfam TCP family transcription factor 76 230 IPR017887 -
Bva13g01749 476 MobiDBLite consensus disorder prediction 172 210 - -
Bva13g01749 476 MobiDBLite consensus disorder prediction 323 345 - -
Bva13g01749 476 MobiDBLite consensus disorder prediction 33 49 - -
Bva13g01749 476 MobiDBLite consensus disorder prediction 263 345 - -
Bva13g01749 476 MobiDBLite consensus disorder prediction 263 281 - -
Bva13g01749 476 MobiDBLite consensus disorder prediction 136 230 - -
Bva13g01749 476 MobiDBLite consensus disorder prediction 1 60 - -
Bva13g01749 476 MobiDBLite consensus disorder prediction 211 230 - -
Bva13g01749 476 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 476 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01749 Bva-Chr13 14103308 14112300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01749 62 476 TCP Transcription Factor Family AT4G18390 42.889 4.20e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva13g01749 TCP 1.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01749 - - jre:109011061 533.102