Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01692 ATGAAAAATACAACTAGCTATAGCTGCAAGGAGAATAGCATCTGCGTGGATTCTGAAAATGGCTACAGGTGTAGATGTGAGGAGGGGTTTCAAGGGAACCCTTATCTCTCTAATGGCTGCCAAGATATTGATGAGTGTATTACTATGAGTCCTTGCAACATGACATGCCACAATTTTGACGGTGGTTATAATTGCTCTTGTCCAAGTGGATACAAAGGAGACGGCAAGAAAGATGGATCTGGCTGCTTTCAAGAGGTTAAATCTAATAAAGAGCTTATCATCGAAATAGCACTAGGCATAAGCATAGGCTTGTTggttcttttcattttgacgTTTTCATTATGTTGGGTGCACAAGCAAAGAAGAGTTAAACAATTTAGGGAAAAATGTTTTATGCAAAATGGAGGGCCCTTGTTACAAGAACGACTTTCTGAACTGCAAAGACAATGTGAAAGAACTAGAATCTTTACAGAAGTTGAGCTTACGAAGGCCACAAACAACTTCCATGAAAGCCGAATCCTTGGCCGTGGAGGACAAGGGATAGTCTACAAGGGTATTTTACCAAATAACCAAGTAGTTGCAATCAAGAGGTCAAGAATAGTTGAAGACCAAAGACAAGTTAAAGATTTTATCAATGAAGTGGATGTGCTTTCCCAAATAAACAACAGGAATGTGGTGAAGCTTTTGGGGTGTTGTCTAGAAACAGAAGCTCCCCTATTAGTTTATGAGTTTGTGTCCAATGGCAACCTATTTGACCGTATTGACCCAACAAAGAATGCACCCTCTCTTCCATGGGAAACTAGGTTAAGTATAGCTGTAGAAATAGCTGAGGCTGTTTCTTATTTGCACTCAGCTGCTTCTGTTCCAATAATTCACAGAGATATAAAATCTAGTAACATACTTTTAGACAAGAATGACAAAGCAAAAGTGTCTGATTTTGGTGCATCAAGGTTGGTTCCTTTAGATCAAACTCAGGTTTTCACGCTTGTGCAAGGCACTCCTGGATATTTGGACCCAGAGTACCTTCAAACAGGTAAGTTGAATGAGAAGAGTGATGTTTACAGTTTTGGAGTTGTGCTTATTGAGTTACTTACTGGAAAAAAAGCAATTCAACTGTTTTGTCCGGAGCAGGATAACACTTTAGTTGTGCATTTTGTATCATCAATGGAAGAAGGGAATTTGATGGAACTTCTTGACAGAAGAGTGTTGAACCAAAGTAATGTAGAGCAAATTATGGAAGTTGCTTCATTAGCAAGGAAGTGTGTGAGACTATTTGGAGAGGAAAGGCCAACCATGAATGAAGTGGCAATGGAATTGAAAGGTCTCATAGCCATGCAGAAACAACAAACGGGCAAAGGTGAGGTTAAATCAGAGGAATATCGATATTTACTTGGCCATTTGGCTAATGTTACTGGCAATTCTTCTTCATACGATAGCACACAGAACCAAATAGCATTTCAAATTGAAGATGGTCGGTG 1478 0.389 MKNTTSYSCKENSICVDSENGYRCRCEEGFQGNPYLSNGCQDIDECITMSPCNMTCHNFDGGYNCSCPSGYKGDGKKDGSGCFQEVKSNKELIIEIALGISIGLLVLFILTFSLCWVHKQRRVKQFREKCFMQNGGPLLQERLSELQRQCERTRIFTEVELTKATNNFHESRILGRGGQGIVYKGILPNNQVVAIKRSRIVEDQRQVKDFINEVDVLSQINNRNVVKLLGCCLETEAPLLVYEFVSNGNLFDRIDPTKNAPSLPWETRLSIAVEIAEAVSYLHSAASVPIIHRDIKSSNILLDKNDKAKVSDFGASRLVPLDQTQVFTLVQGTPGYLDPEYLQTGKLNEKSDVYSFGVVLIELLTGKKAIQLFCPEQDNTLVVHFVSSMEEGNLMELLDRRVLNQSNVEQIMEVASLARKCVRLFGEERPTMNEVAMELKGLIAMQKQQTGKGEVKSEEYRYLLGHLANVTGNSSSYDSTQNQIAFQIEDGR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01692 492 Pfam Protein kinase domain 168 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01692 492 SMART serkin_6 168 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01692 492 Pfam Calcium-binding EGF domain 42 79 IPR001881 GO:0005509
Bva13g01692 492 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 56 67 IPR000152 -
Bva13g01692 492 Gene3D Phosphorylase Kinase; domain 1 140 244 - -
Bva13g01692 492 Gene3D Laminin 2 44 - -
Bva13g01692 492 SUPERFAMILY Growth factor receptor domain 7 75 IPR009030 -
Bva13g01692 492 CDD STKc_IRAK 174 442 - -
Bva13g01692 492 ProSiteProfiles Protein kinase domain profile. 168 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01692 492 SMART egf_5 6 41 IPR000742 -
Bva13g01692 492 SMART egf_5 45 83 IPR000742 -
Bva13g01692 492 SMART egfca_6 42 83 IPR001881 GO:0005509
Bva13g01692 492 SMART egfca_6 8 41 IPR001881 GO:0005509
Bva13g01692 492 Gene3D Transferase(Phosphotransferase) domain 1 245 463 - -
Bva13g01692 492 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 476 IPR045274 GO:0007166
Bva13g01692 492 Gene3D Laminin 45 84 - -
Bva13g01692 492 CDD EGF_CA 9 32 - -
Bva13g01692 492 Pfam EGF-like domain 9 33 IPR000742 -
Bva13g01692 492 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 3 476 - -
Bva13g01692 492 SUPERFAMILY Protein kinase-like (PK-like) 151 438 IPR011009 -
Bva13g01692 492 CDD EGF_CA 42 74 - -
Bva13g01692 492 ProSiteProfiles EGF-like domain profile. 42 74 IPR000742 -
Bva13g01692 492 ProSitePatterns Calcium-binding EGF-like domain signature. 42 65 IPR018097 GO:0005509
Bva13g01692 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01692 Bva-Chr13 12831166 12834400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01692 9 492 Receptor kinase-like Gene Family AT1G21250 50.000 7.75e-158 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva13g01692 Pkinase 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01692 - - qlo:115959581 570.466