Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01686 ATGGCTGAGGCGTTACTTGAAGTTGTTCTTCTGAATTTGGACTCTCTCATCCGGGAGGAGCTTGCAACCTTTTGGCATGTAGATGAAGAGATAGAAAAACTATCAAGCATTCTCACTACCATCAAGGCTACCCTCGAAGACGCTGAGCAGATgcaaataacaaacaaaaccTTAAAGATTTGGCTGCAGAAACTCAAAGATGCGGCATGTGTGCTACATGATATCTTGGATGAGTGCTCCATAAAATCCTCTCAACTTGGCTATGAAGGAACAAATTTGACACCTTCAAACCAGGTAAGCACACCTTCATCAACCTTTCTCAATCCCAAGAACATGTTGTTCCGTTATAAGGTTGgtaagaagatgaaaaaggtAATGAAGAGAATAGATCaaatagcaaaagaaagaCAGGAGTTTCACATAGGTGAGGGGATAGTGGAAAGAGGAACTGAAGTTGTTGAAAGCCGCCAAACCAGCTCAATTATTCCTCAACCTCAAGTATATGGCAGAGATGATGATAGAGAAAAGATTGTGGACTTTCTTCTAAGGCATGCTAGTGAATATGTTGATCTCTCCATTTATTCCGTTGTTGGAATTGGTGGAGTTGGAAAAACAACACTTGCTCAGGTGGTATTCAATGATAAGCGAATAACTAGGCACTTTGACTTGAAAATTTGGGTTTGtgtttctaataattttagtgTGAAAAGGATATTGCAATCAATTATTGAATCTATCTTGAAACAAAATTGTAATGTCTCGGAGTTAGAAGCAATCCAGAAACAAGTTCGGGAATTACTACAAAGCAAAATGTACTTGCTTGTTTTAGATGATGTGTGGAATGAAAACCAAGATGAATTGAACAAGTTAAAATCTATATTGACATGTCGTTCCAAAGGTGCTTCAGTTTTAGTCACTACTCGTTTGAGAAGTGTTGCATCCCTTGTGGGAGCAATCCCAACAACTCATACCTTGCTAGGTTTATCTGAGGATGCTTGCTGGTCATTGTTCAAACAACGTGCATTTGGCCTTGATAGAGAAGAGCGTGCGGAGCTGGTGGCACTCCAAAAGGAGATTGTAAAGAAATGCGGGGGTTTGCCTCTCGTAGCCAAGGCACTGGGAGGCCTTTTACGCTTGAAAAGTGAGAAAAGAGAATGGCTTCATGTTATTGAAAGTGAGATTTGGAATTTATCAGAGAGTGAAAATTCTGTCTTACCTGCCTTGAGGTTGAGTTACTTTAATTTGTCCTTACAATTGAGGCAATGTTTTGCATTTTGTGCCATGTTTCCTAAAGATGAGGTAATTAAGATGGAATTGTTGATTAATCTTTGGATGGCTAATGggtttatctcaactagcggAAGATTAGCTATGGAGGATGTTGGTAGTGAGATTTGGAATGAATTATATCAAAGATCCTTTTTCCAAGATATCAAGACTAATGAACTTGGCCAAGTGGAGAGTTTCAAAATGCATGATCTTGTACATGATCTAGCTTGTTCAATTGCAGGCGATGAGATTTCGGTGTTGGGGGATGCAAGCTCGGCTAATTTGTCAAGAAGTACGCGTCATATAGGTTTCTTTGGTtccaataaaccatttgactTGGGCGGCTTGAGAAATGTTGAATCTTTGCGGACATTGTTGTTGAATGATCATAGGAGATGCATTCATTTTGACTTTTCTACATACCATTCTATACGAGCACTTAGTGTACCAAGAAACATTTCTTCGATCTCTCTTGAAATTTCATACATTTG 1760 0.371 MAEALLEVVLLNLDSLIREELATFWHVDEEIEKLSSILTTIKATLEDAEQMQITNKTLKIWLQKLKDAACVLHDILDECSIKSSQLGYEGTNLTPSNQVSTPSSTFLNPKNMLFRYKVGKKMKKVMKRIDQIAKERQEFHIGEGIVERGTEVVESRQTSSIIPQPQVYGRDDDREKIVDFLLRHASEYVDLSIYSVVGIGGVGKTTLAQVVFNDKRITRHFDLKIWVCVSNNFSVKRILQSIIESILKQNCNVSELEAIQKQVRELLQSKMYLLVLDDVWNENQDELNKLKSILTCRSKGASVLVTTRLRSVASLVGAIPTTHTLLGLSEDACWSLFKQRAFGLDREERAELVALQKEIVKKCGGLPLVAKALGGLLRLKSEKREWLHVIESEIWNLSESENSVLPALRLSYFNLSLQLRQCFAFCAMFPKDEVIKMELLINLWMANGFISTSGRLAMEDVGSEIWNELYQRSFFQDIKTNELGQVESFKMHDLVHDLACSIAGDEISVLGDASSANLSRSTRHIGFFGSNKPFDLGGLRNVESLRTLLLNDHRRCIHFDFSTYHSIRALSVPRNISSISLEISYI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01686 586 Gene3D - 327 416 IPR042197 -
Bva13g01686 586 PANTHER DISEASE RESISTANCE PROTEIN RP 32 571 IPR044974 GO:0006952
Bva13g01686 586 CDD RX-CC_like 2 93 IPR038005 -
Bva13g01686 586 Gene3D - 6 140 - -
Bva13g01686 586 PANTHER OS05G0414200 PROTEIN 32 571 - -
Bva13g01686 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 426 IPR027417 -
Bva13g01686 586 Coils Coil 31 51 - -
Bva13g01686 586 Pfam NB-ARC domain 171 412 IPR002182 GO:0043531
Bva13g01686 586 Pfam Rx N-terminal domain 6 87 IPR041118 -
Bva13g01686 586 Gene3D - 418 500 IPR036388 -
Bva13g01686 586 Gene3D - 150 318 IPR027417 -
Bva13g01686 586 PRINTS Disease resistance protein signature 540 556 - -
Bva13g01686 586 PRINTS Disease resistance protein signature 363 377 - -
Bva13g01686 586 PRINTS Disease resistance protein signature 266 280 - -
Bva13g01686 586 PRINTS Disease resistance protein signature 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01686 Bva-Chr13 12594688 12596448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01686 189 454 WRKY Transcription Factor Family AT5G45050 23.827 9.54e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01686 - - mtr:MTR_5g035280 583.563