Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01683 ATGGCGTCATCTTCCAATAATTCTCAAAGGAAATACGATGTCTTTGTTAGTTTTCGAGGGAAAGACACTCGACGTGGTCTTGTCGGCCATTTGGAGAAGGCActgaatgagaaaaaaatcgAAGTATTCATAGACGATAAGCttaagaaaggaaatgaaatatCACCTGCACTTATTAGAGCAATTAAAGAATCAGATATTTCTTTGATTGTATTTTCCAAATGCTATGCTGATTCGATATGGTGCTTAGAAGAACTTGTGAAAATACTAGAGTGCAAGGAGAATAATGGTGACTACACGATGGTACCTATCTTTTGTGATGTAGATCCATCAACGGTACGCCGTCAAATAGGGAGTTATAGAGAAGCATTTGATAAACATGAAACGAGCTCGAGACATGATCTTTGCAAGTTACAGAGTTGGAGAACTGCTTTGACAACAGCTGCCAATTTATCTGGATTAGTTTCCTCAGATTTTAAGAATGATGCTGAGCTTGTTGAAAAGATTGTCAATCAAGTGCTGCAAAGATTGAATGAAATTAGGCCCCCATATGTGTTAACAGGGCTAGTCGGAATTCAAGAACAAATTGAACAATTGGAATCCTTACTGGGTAATGGGAAACAAAATGTTCATATCATTGGTATTTGGGGCATGGGTGGTGTAGATGATGCAATGGGAATTGACAAAGAGGTTGTAATATCTCTACTTGATGGATGTGGCCTTTATCCGAAAATTGGGTTGAGAGTTCTCGAAGATAGAGCGCTTATAACTATACTGTGTTCCAGATATATAACCATGCATGATTTGCTTCAAGAAATGGGTCGGTGGATTGTTTACGAGGAATCACCAAATAATCCTGGTAAACGTCGCCACTTGTGGGATCatgatgatatttataaagtatTGAAGAACTTTCAGGGGACGGAAGTTATAGAAAGTATAAGCCTGCAATGTGAGAGAGTTGATGATATTCAGTTAGATGCCAATGCTTTTAAAGGGATGagtaatctaaaatttttgaaattcaagTGCCAATATGGATTGAGTATTTATGACAAGAGTCTTGATTCATTACCAGTGGACCTAAAATACTTCTACTGGAAATGGTATCCTTTGAAATTCCCTCCAAAATTATGTTTGAAGAATCTTGTTGAATTTCACATGCCCAATAGCAAACTAGAAAGGCTTTGCTATGGAATTCAGGATCTtgggaatttaaaaaaaattaacctttGTGGTTCTGAACACTTGAAAGAGCTCCCAAATATGTCCAGGGcctcaaaacttaaaattgttGACCTCAGATCTTGCCGTAGTTTACATTGTGTTCATCCttctattttatctttgaGATCTTTAGAATATCTTGACCTTGGAGGCTGCTCAAGTCTGAAGAAGCTTTCATTGTCGACGTCATTAGAGcagttgaaatatttgatgttagATGAAACCAAGTTGGTGAACTTGCCTGCAAGCATCAAGTATCTTTCAAATCTGCAACATCTTTGTTTGTCTGGGTGCTCGAGGCTTCGGTGTATACCTGAGCTTCCTCCATCCATTGAACATTTAAATGCCAATCACTGCAGATCCATGGATGTGTTCACTCCAAATTTTTCAACGTTTTGTCCCAGGATACTTGATCTCATAAATTGTGAAAAATTGGGTGAAGGTACAATCAGGGATATTACGAGGAACTTTGTGTACTTTACAACAATGGGAACATTATATCAACAACCAGCTCGAAGAAAGCAGTATAGGGTTGATGGTGATTCTTCGACATATTTCCCTGAAAACAAAATCTCAGAAGTTTTGGATTTCTTGAAAAGATCATGTCCTGTACCGGAAACCATTCAAGGGTGTCCTAATTTTGACTTGATGACCTTGATTATTTGTGTCAATTTTTGCAAACTATCACAAAGTATAATTCTTAGATGCAGTTGCTTTTTGCAAGCAAGTAATGGTGCAAGGATCCAGTGTGGCGAGATAGCTTTGGTTTGTCCCCCGACAAATGGTGACcatgtttttttattgcagCATGAGAAATTTAGTCGCAATATAATAAATGGAATCAAAGAAAGTAGAGTCTCACatccaaaaatttcatttgaattctACTTTGAGAGTTGCTACGACAACGAGGAAAAACTTCGTACAGTAGAGTATGAGATTCATCCAACCGGCAATCTTGGGGCATTTGAATACTTTCTTGATAGAAGCATGGATTATGTACATGGTATAAAAAAGATAGGGGTGTATCCAATATATGCCTCAGAATTACACCACCTCTTTGATACTAATAACAAGTCATCTCAGGACACTGGTCAGCCACAATCGGGGAtgaaaaacaatagaaatataCTGGCAGTTCAAAGTGGTGCAACAAGTCTCAAATTGAGCAAACGGCTTCTTCCTCAcagccaaaaagagaaaaagaaaagcaagaaattGAAGGCAGTTCATCCTGACTGTAACTTAGAATCTGCAGAGCAATA 2492 0.3527 MASSSNNSQRKYDVFVSFRGKDTRRGLVGHLEKALNEKKIEVFIDDKLKKGNEISPALIRAIKESDISLIVFSKCYADSIWCLEELVKILECKENNGDYTMVPIFCDVDPSTVRRQIGSYREAFDKHETSSRHDLCKLQSWRTALTTAANLSGLVSSDFKNDAELVEKIVNQVLQRLNEIRPPYVLTGLVGIQEQIEQLESLLGNGKQNVHIIGIWGMGGVDDAMGIDKEVVISLLDGCGLYPKIGLRVLEDRALITILCSRYITMHDLLQEMGRWIVYEESPNNPGKRRHLWDHDDIYKVLKNFQGTEVIESISLQCERVDDIQLDANAFKGMSNLKFLKFKCQYGLSIYDKSLDSLPVDLKYFYWKWYPLKFPPKLCLKNLVEFHMPNSKLERLCYGIQDLGNLKKINLCGSEHLKELPNMSRASKLKIVDLRSCRSLHCVHPSILSLRSLEYLDLGGCSSLKKLSLSTSLEQLKYLMLDETKLVNLPASIKYLSNLQHLCLSGCSRLRCIPELPPSIEHLNANHCRSMDVFTPNFSTFCPRILDLINCEKLGEGTIRDITRNFVYFTTMGTLYQQPARRKQYRVDGDSSTYFPENKISEVLDFLKRSCPVPETIQGCPNFDLMTLIICVNFCKLSQSIILRCSCFLQASNGARIQCGEIALVCPPTNGDHVFLLQHEKFSRNIINGIKESRVSHPKISFEFYFESCYDNEEKLRTVEYEIHPTGNLGAFEYFLDRSMDYVHGIKKIGVYPIYASELHHLFDTNNKSSQDTGQPQSGMKNNRNILAVQSGATSLKLSKRLLPHSQKEKKKSKKLKAVHPDCNLESAEQ 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01683 830 Pfam TIR domain 11 190 IPR000157 GO:0007165
Bva13g01683 830 SUPERFAMILY L domain-like 278 568 - -
Bva13g01683 830 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Bva13g01683 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 227 476 IPR044974 GO:0006952
Bva13g01683 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 221 IPR044974 GO:0006952
Bva13g01683 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 482 732 IPR044974 GO:0006952
Bva13g01683 830 PRINTS Disease resistance protein signature 212 227 - -
Bva13g01683 830 PRINTS Disease resistance protein signature 448 464 - -
Bva13g01683 830 SMART till_3 11 151 IPR000157 GO:0007165
Bva13g01683 830 Gene3D Ribonuclease Inhibitor 471 567 IPR032675 -
Bva13g01683 830 Gene3D Ribonuclease Inhibitor 294 470 IPR032675 -
Bva13g01683 830 ProSiteProfiles TIR domain profile. 10 177 IPR000157 GO:0007165
Bva13g01683 830 MobiDBLite consensus disorder prediction 797 830 - -
Bva13g01683 830 Gene3D - 8 181 IPR035897 -
Bva13g01683 830 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 227 476 - -
Bva13g01683 830 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 221 - -
Bva13g01683 830 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 482 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01683 Bva-Chr13 12536812 12543383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01683 227 582 WRKY Transcription Factor Family AT4G12020 32.750 9.92e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01683 - - hbr:110651543 327.405