Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01674 ATGCAATGTTCTATACCTCTGGAAATAGGTGATCTTGATAGACTTGAGGAATTAGGTTTAGGATATGATGATTTGAGAGGGTATGTTCCTATgaatattttcaacatttcAACATTGACATACTTGTATCTTGCGGAAAGTTCCCTCTCAGGATTTCTTCCATCAGATATCGGACAGAGTCTTTCAAACCTTGAAGAACTGCATTTGTATGGAAATAAATTTAGTGGGAAAATTCCAAGCAGCATATCGAATGCCTCTAAACTAACGGAGATAGAGCTACAGGACAACAAGTTCAGTGGAGTTATTCCTAAGGCTCTTGGGAAATTAAGATACCTGAAGTATCTCGATGTCTCAATCAACAATTTGGTCGGTTATACCCATGAAATGATCAGCTCTctaaaaaattgcaaattctTGATTTATCTAGATATATCTTTGAATCCTTTGCATGGAAAACTTCCCAAGGAAGTTGGAAATTTATCTCATTCACTTCAAGTATTCATGATTGAATCTTCCAACACTGATGGTAGCATTCCAatagaaattggaaatttaagcagtttattcaaattaagttTATCTGGGAACAATTTGATTGGCCCACTTCCTTTTACAATTGGCAAACTACATGgtcttcaatttttgaatcTCGTAGATAATTGGCTTCAAGGCGCATTCATTGATGAAATCTGTCAAATGAAAAGTCTAGGTGGACTGGGTCtagcaaataataaattttctgggTTGATTCCAACATGTTTGGGGAATCTCACTTCTCTAAGATATGTTGACTTCAGctcaaataactttttttctgaGATACCCACATCTCTTTGGAGTCTCACAGATATCCTTGAGTTGAATTTATCATTCAACATTTTTACTGGAACTGTTCCACTTGATATTGGAAACTTGGAAGCTCTTACTCTCTTAGACCTGTCAAGAAATAAGATTTCAGGTAACATACCTACATCCATTGGAGGCCTGAAAACTTTGCAGAGTCTCTCCTTAGCACACAATGAACTAAAGGGGTTTATACCAGAATCAATCGTCTACTTGGTGAGCTTGGAGTCCTTGGacttatctcaaaattatttatctggTGAAATCCCCAAGACCTTGCAGTCCCTTGGCTATCTCAAATATATCAAcctttcttataatttattgcaAGGAGAGATTCCGGATGGTGGACCTTTCAAGAATCTCGATGCTAAATCTTTCATGTTCAATAAAGCACTTTGTGGCAACCCTCGTCTACAAGTCCCACCATGTAGAGAAATCAGGTCAACAACAAATGCAAAGTTGATTTTCATCAAATTCATACTTCCTGTATTCGTGTCAATAATTTTGGTTGTTTCATGCGTAATCATTCTgcgatgtaaaaaaaaaaaggagggtGATCATCCAGCCGAAAGGAATTCATGGGATTTAGCTATGCCACCAAGGATTTCCTACTTTGAACTTCTACAAGCAACCAATAGATTTGATGAAACTAATATGCTTGGTTGTGGAAGTGTTGGTTCTGTGTTTAAAGGGATACTTTCAAGTGGGTTGACAGTTGCAATTAAAGTATTCAATTCGGAGTTAGAAGCAGCATCTAGAAGCTTTGACGTAGAATGTGAGGCAATGCGCAATTTACGTCATCGCAATCTTGTTAAGGTCATTAGTTGTTGTTCAAATTCTGATATCAAGTCTTTGGTAATGGAGTTCATGCCAAATGGGAGCTTGGAAAAATGGTTATATTCTCATAACTATTGCCTTAGTTTTTCACAAAGGTTGAACATCATGATAGATGTAGCATCTGCATTAGAGTATCTCCACCATAGTTTTTCAAAGCCAGTGGTTCACTGTGACATAAAACCTAGTAATGTGCTGTTGGATGAATATATGGTTGCTCATGTAAGTGATTTTGGCATTGCCAAACTTTTGGATAAAGAACAATCTAAAACACATACAAAGACCTTGGGTACATTTGGTTACATTGCACCAGAGTATGGAACCAAGGGTCTTGTTTCTGCAAAAGGAGATGTGTACAGCTATGGCATTATGTTGATGGAAGTgttcacaagaaaaaaaccaAACGATGACATGTTTGTAGAAGGATTGAACTTAAAAAGCTGGGTCACTAAGTCAATGCCTAATGCAATAACTAAAGTTATGGATTCTAATATGCTGCTGGGAGAAGGAGAACAACACATTGGTGAGATAACAAGATctgttttattgattttggaaTTAGCCTTGAATTGTTGCACAGATCAGCCTGAGGAAAGAATCAACATGACAGATGTCATAGCATCCTTGAACAAAATCAACATCATGTTCATGAAGAGATA 2339 0.3412 MVAHVSDFGIAKLLDKEQSKTHTKTLGTFGYIAPEYGTKGLVSAKGDVYSYGIMLMEVFTRKKPNDDMFVEGLNLKSWVTKSMPNAITKVMDSNMLLGEGEQHIGEITRSVLLILELALNCCTDQPEERINMTDVIASLNKINIMFMKR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01674 149 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 147 - -
Bva13g01674 149 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 147 - -
Bva13g01674 149 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01674 149 SUPERFAMILY Protein kinase-like (PK-like) 2 145 IPR011009 -
Bva13g01674 149 Pfam Protein kinase domain 5 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01674 149 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01674 Bva-Chr13 12250714 12251780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01674 1 148 Receptor kinase-like Gene Family AT3G47580 37.107 1.72e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva13g01674 Pkinase 7.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01674 - K13420 gmx:100784397 197.208