Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01671 ATGGCTTGTGTGAAATTGGGTTCTAAAGCAGATGCATTCCAACGTCAAGGGCAGGCGTGGTTCTGCACAACTGGGCTTCCTAGTGATATCATCGTGCAAGTTGGTGAAATGTCCTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGTCGGGTTCTGGAGAGACTGATTGCTGAAACTTCTGAACAAGAGGAAGAATGTGTCATAAACCTCCCTGACATTCCTGGTGGAGCCAAAACATTTGAACTTGTGGCGAAATTTTGCTATGGGGTGAAGCTCGAACTTACTGCCTTAAACATTGTGTACCTCTGGTGTGCTGCTGAGCATCTTGAAATGACAGAGGAATATGATGAAGATAACCTGATTTCTCAAACTGAATCCTTTCTCAGTGAAGTGGTACTGAAAAGTTGGAAAGACTCTCTGAAGGCACTTTA 434 0.4401 MACVKLGSKADAFQRQGQAWFCTTGLPSDIIVQVGEMSFHLHKFPLLSRSRVLERLIAETSEQEEECVINLPDIPGGAKTFELVAKFCYGVKLELTALNIVYLWCAAEHLEMTEEYDEDNLISQTESFLSEVVLKSWKDSLKAL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01671 144 CDD BTB_POZ_NPY3-like 19 122 - -
Bva13g01671 144 Gene3D Potassium Channel Kv1.1; Chain A 9 136 IPR011333 -
Bva13g01671 144 PANTHER OS12G0117600 PROTEIN 1 144 IPR043454 -
Bva13g01671 144 Pfam BTB/POZ domain 27 114 IPR000210 GO:0005515
Bva13g01671 144 PANTHER BNAUNNG00030D PROTEIN 1 144 - -
Bva13g01671 144 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Bva13g01671 144 SUPERFAMILY POZ domain 16 114 IPR011333 -
Bva13g01671 144 SMART BTB_4 28 121 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01671 Bva-Chr13 12244304 12246340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01671 8 144 EF-hand Containing Proteins AT3G44820 48.921 1.92e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva13g01671 BTB 6.8e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01671 - - gmx:100794676 254.218