Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01629 ATGTCGCCAGCCTCCGGTAAGTGCAGTAAAATCCGGCACATTGTGCGAATCCGGCAAATGCTACTCCAGTGGCGAAAGAAAGCTCGTATAACGGCGGTGCGTGCGCCGTCCGACGTACCCACCGGGCATGTGGCCGTGTGTGTTGGCCCGAACAGTAGGAGATTTATCGTGCGCGCGACGTACCTGAACCACCCCATCTTTAAGAAGCTTCTGGTGCAAGCCGAGGAAGAGTATGGCTTCTGCAACCAAGGCCCCTTGACGATCCCCTGCGACGAGTCGGTCTTCGAAGAGCTGCTGCGGGTTATGTCCCGATCCGGGTCGGGTCACTCGGCGCGGTTCTTGAGCATGGAAGATCTTCAGAGGGCCTGCCACGTGGATGTCCGATGTAATTTTGATATGGTGGGGGAATCCTGGCCGTTGCTTTACGAGAAGCCCGTTTGCTA 443 0.5711 MSPASGKCSKIRHIVRIRQMLLQWRKKARITAVRAPSDVPTGHVAVCVGPNSRRFIVRATYLNHPIFKKLLVQAEEEYGFCNQGPLTIPCDESVFEELLRVMSRSGSGHSARFLSMEDLQRACHVDVRCNFDMVGESWPLLYEKPVC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01629 147 Pfam Auxin responsive protein 17 101 IPR003676 GO:0009733
Bva13g01629 147 PANTHER SMALL AUXIN-UP RNA-RELATED 6 143 - -
Bva13g01629 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 143 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01629 Bva-Chr13 9781022 9781830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01629 6 147 Calmodulin-binding Proteins AT4G34750 51.333 3.02e-45 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01629 K14488 - csin:114267397 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01629 13 9781022 9781830 Bva13g01629 13 9781022 9781830 ECH