Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01628 ATGGCCAttagaaaatcaaacaagCTTCCCCAAACTGCTGTCCTCAAGCAAATCCTTAAGAGATGTTCAAGCTTAGGCAAGAAAAATGGATACGACGATGATGGATTGCCTCTTGATGTCCCAAAAGGCCATTTTGCTGTTTATGTTGGGGAAAACAGAAGTAGGTACATTGTcccaatttcatttttgactCACCCAGAATTCCAATCTCTCCTTCGACAAGCTGAAGAAGAATTCGGCTTCGATCACGATATGGGTCTCACGATTCCTTGTGAAGAAGTTGTTTTCCGGTCCCTAACATCAATGCTTAGATG 314 0.3885 MAIRKSNKLPQTAVLKQILKRCSSLGKKNGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01628 104 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Bva13g01628 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Bva13g01628 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01628 Bva-Chr13 9768628 9769279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01628 5 103 Calmodulin-binding Proteins AT4G34750 40.404 5.07e-21 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01628 13 9768628 9769279 Bva13g01628 13 9768628 9769279 ECH
Bva13g01628 13 9768628 9769279 Bva08g00842 08 4327466 4327892 ECH