Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01622 ATGGCTATTCGTTTGCCTGCAATAAGGAATGCCAAGCACATCCTTCGCCGATCTCTTTCCAATTCCAGAGAAGCAATTTCAATGTCTACTAATGTACCAAAGGGGTATTTTGCAGTGCATGTTGGGGAAGAGCAAAAGAAGATATTTGTGGTTCCTATATCATACCTAAATAAACCTGAATTCCTAGAGTTGCTAAACAAAGCTGAAGATGAATTCAGGTTTGATCACCCAATGGGTGGCCTTACAATCCCCTGCAGTGAAGAAATCTTCATTGATATCACTTCTCGCTTGGCACCATA 299 0.4114 MAIRLPAIRNAKHILRRSLSNSREAISMSTNVPKGYFAVHVGEEQKKIFVVPISYLNKPEFLELLNKAEDEFRFDHPMGGLTIPCSEEIFIDITSRLAP 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01622 99 Pfam Auxin responsive protein 20 96 IPR003676 GO:0009733
Bva13g01622 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 97 IPR003676 GO:0009733
Bva13g01622 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01622 Bva-Chr13 9742421 9743198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01622 2 90 Calmodulin-binding Proteins AT3G43120 41.489 6.82e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01622 K14488 - qsu:111994738 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01622 13 9742421 9743198 Bva13g01622 13 9742421 9743198 ECH