Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01617 ATGGGTATTCGTTTACCTTCCTTGGTTCTTCAAGCAAAGCAAATGCTCAAGTCACAGCAGCATGTTCATGGCAGAAACCATCCCAGTGTTCCAAAGGGACATGTAGCAGTCTATGTAGGAGAGTTTCAGAGGCGTTTTGTGGTGCCAATATCCTATTTGAGCCATCCACAGTTTCTTGACTTGTTGAATCGAGCTGAGGAAGAGTTTGGATTCCATCATCCAATGGGTGGCCTCACGATTCCTTGCAGAGAAGATGCTTTTATCAATCTCACCTCTCAGCTACGCGCCTCGTG 293 0.4642 MGIRLPSLVLQAKQMLKSQQHVHGRNHPSVPKGHVAVYVGEFQRRFVVPISYLSHPQFLDLLNRAEEEFGFHHPMGGLTIPCREDAFINLTSQLRAS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01617 97 Pfam Auxin responsive protein 13 92 IPR003676 GO:0009733
Bva13g01617 97 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 96 - -
Bva13g01617 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01617 Bva-Chr13 9715183 9715476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01617 28 87 Calmodulin-binding Proteins AT3G43120 56.667 1.55e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01617 K14488 - gmx:102663761 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01617 13 9715183 9715476 Bva13g01617 13 9715183 9715476 ECH