Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01602 ATGTGGAAGGCAGCTATGACAGAGTTGGTAGCAACTGCATCCTTAATGTTCACATTGACAACCTCCATTATTGCATGCTTGGACTCCCACGAAGCTAATCCAAAACTTCTTGTTCCCTTTGCAGTATTCACCGTAGCTTTCCTCTTCCTCATGGTGACAGTGCCTCTATCTGGAGGCCACATGAGCCCTATTTTCACCTTCATTGCCGCTCTCAAGGGCATTGTAACTCTTGCTCGCGCTCTGCTCTACATAATAGCACAATGCATTGGCTCAATACTTGGCTTTCTCATAATCAAGAGCGTCATGGAGCATAAgttaatagaaatatattcATTGGGTGGCTGTGCAATTGTTGGCAATGGAGAAAACCCAGGAGTAAAACGACAAGTCGCTATGCTATTGGAGTTTTCTTGCACTTTTGTGGTGCTCTTTGTGGGGGCCATGGCATTGGCAGTGTTTGTGTCCATAACTGTGACTGGGAAGGGGGGTTATGCTGGAGTGGGCCTGAACCCAGCTAGATGTTTGGGCCCAGCATTGCTTCAGGGAGGCCCATTATGGGATGGACATTGGGTTTTTTGGGTTGGGCCCTTCTTGGCCTGTGTTATCTACTATTGTGTTTCTGTGAACTTACCCAAAGAGGGTTTGGTTTGGGTGGATGGAGAGTACGATTTCTCCAAATTGGCTTGGGCTTGCTTTAATGGAAGGAGCAATGCTATTCATCTTCAAGTATA 731 0.4583 MWKAAMTELVATASLMFTLTTSIIACLDSHEANPKLLVPFAVFTVAFLFLMVTVPLSGGHMSPIFTFIAALKGIVTLARALLYIIAQCIGSILGFLIIKSVMEHKLIEIYSLGGCAIVGNGENPGVKRQVAMLLEFSCTFVVLFVGAMALAVFVSITVTGKGGYAGVGLNPARCLGPALLQGGPLWDGHWVFWVGPFLACVIYYCVSVNLPKEGLVWVDGEYDFSKLAWACFNGRSNAIHLQV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01602 243 Pfam Major intrinsic protein 2 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01602 243 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Bva13g01602 243 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 146 237 - -
Bva13g01602 243 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 146 - -
Bva13g01602 243 Gene3D Glycerol uptake facilitator protein. 1 212 IPR023271 -
Bva13g01602 243 PANTHER AQUAPORIN-LIKE 146 237 - -
Bva13g01602 243 PANTHER AQUAPORIN-LIKE 1 146 - -
Bva13g01602 243 PRINTS Major intrinsic protein family signature 190 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01602 243 PRINTS Major intrinsic protein family signature 42 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01602 243 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01602 243 PRINTS Major intrinsic protein family signature 151 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01602 243 PRINTS Major intrinsic protein family signature 3 22 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01602 243 SUPERFAMILY Aquaporin-like 1 203 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01602 Bva-Chr13 9603802 9604606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01602 3 219 Major Intrinsic Protein MIP AT2G36830 29.752 5.31e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01602 K09866 - gmx:100804160 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01602 13 9603802 9604606 Bva13g01602 13 9603802 9604606 ECH