Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01583 AtgtttgcttcttcttctgctaTCACCTTGCTCCACGGCTCTCCCAGGAAAGCCCATTTCCCAGGAAAGAAGATTGCTGCCAGTTTTACCACAAGGGAAAACAGAGCACCCCGTTGTTTTGCCCCAAAGATGGCTTCCCCTGTTTCGCTCTATGAGGTGCTCGGAATTTCGATGACGGCCGATTCCCATGAAATAAAGGCTGCTTACAGAAAGCTGGCAAGATCTTGCCACCCCGACGTGGTGGCCATGAATCAGAAGGAAAGCTCTGCTAACGAGTTTATGAAGATTCATTCAGCTTACTCCACATTATCAGACCCATACAAGCGAGCTCAATATGACCGAGTAATTTATAGCCACAGAAAACCTCTCAACTATTCAAATCTAACCATGGATGGATTTGGACAAGCTGGGAGGAATTGGGAGACTGACCAGTGTTGGTA 440 0.4523 MFASSSAITLLHGSPRKAHFPGKKIAASFTTRENRAPRCFAPKMASPVSLYEVLGISMTADSHEIKAAYRKLARSCHPDVVAMNQKESSANEFMKIHSAYSTLSDPYKRAQYDRVIYSHRKPLNYSNLTMDGFGQAGRNWETDQCW 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01583 146 PRINTS DnaJ domain signature 108 127 IPR001623 -
Bva13g01583 146 PRINTS DnaJ domain signature 69 84 IPR001623 -
Bva13g01583 146 PRINTS DnaJ domain signature 88 108 IPR001623 -
Bva13g01583 146 PRINTS DnaJ domain signature 51 69 IPR001623 -
Bva13g01583 146 PANTHER - 24 146 - -
Bva13g01583 146 Pfam DnaJ domain 50 113 IPR001623 -
Bva13g01583 146 SUPERFAMILY Chaperone J-domain 44 120 IPR036869 -
Bva13g01583 146 SMART dnaj_3 48 108 IPR001623 -
Bva13g01583 146 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 24 146 - -
Bva13g01583 146 CDD DnaJ 51 105 IPR001623 -
Bva13g01583 146 Gene3D DnaJ domain 41 131 IPR036869 -
Bva13g01583 146 ProSitePatterns Nt-dnaJ domain signature. 93 112 IPR018253 -
Bva13g01583 146 ProSiteProfiles dnaJ domain profile. 49 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01583 Bva-Chr13 9471151 9471817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01583 51 127 C2H2 Transcription Factor Family AT1G74250 39.506 4.81e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01583 - - rcu:8265346 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01583 13 9471151 9471817 Bva13g01583 13 9471151 9471817 ECH
Bva13g01583 13 9471151 9471817 Bva14g02311 14 19940640 19941215 ECH
Bva13g01583 13 9471151 9471817 Bva08g00857 08 4410524 4411268 ECH