Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01533 ATGAAAGAGTGTAATTTActACTCGGAGAAAGACAGACAGAAAGGAGTCTCTGGTCAGAGGCGGAGTCTGGGAGCCATTGTACTCAGTGTCGCCGGCGCTCCAAGCTCCGACCATTTTCCGAACTTATCTTTGAACCGATAACCTCTTTCATGGAACAGTACGAGAAAGTTGAGAAGATTGGTGAAGGAACCTATGGTGTGGTCTATAAGGCTCGTGACAAGGTCACGAATGAGACTATAGCTTTGAAGAAAATTCGACTCGAGCAAGAAGATGAAGGAGTGCCAAGCACTGCCATACGTGAAATTTCCCTTCTGAAAGAAATGCAGCATAGGAACATTGTTAgGTTACAGGATGTAGTTCACAGTGAGAAGCGTTTGTATCTGGTTTTTGAGTACCTGGACTTAGATCTAAAGAAACACATGGATTCATCTCCAGATTTTGCAAAAGACCCTCGTCAAGTAAAAATGTTCCTTTATCAAATTCTCTGTGGAATTGCATACTGTCATTCACACAGAGTTCTTCATAGAGACTTGAAACCACAGAATCTGTTGATAGATCGGCGCACTAATGCACTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGTATTCCTGTCAGGACATTTACACATGAGGTGGTCACCCTCTGGTACAGAGCTCCAGAAATATTGCTAGGGTCTCGCCATTATTCTACTCCAGTTGATGTTTGGTCAGTAGGCTGTATATTTGCAGAGATGGTAAACCAGCGACCACTCTTTCCTGGAGACTCTGAGATTGATgaattgtttaaaatattcagAATCTTGGGTACGCCAAATGAGGATACATGGCCTGGAGTGACTTCATTACCTGATTTTAAATCAGCCTTCCCCAAGTGGCCTTCCAAGGATCTAGCAACTGTGGTTCCAAATCTCGAGCCAGCTGGTCTCGATCTTCTTTCTAACATGCTCTGCTTGGATCCCACCAGAAGAATCACTGCAAGGAAGGCTCTCGAGCATGAGTATTTCAAAGACATCAAATTTGTACCCTA 1034 0.4294 MKECNLLLGERQTERSLWSEAESGSHCTQCRRRSKLRPFSELIFEPITSFMEQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSAFPKWPSKDLATVVPNLEPAGLDLLSNMLCLDPTRRITARKALEHEYFKDIKFVP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01533 344 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Bva13g01533 344 SMART serkin_6 54 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01533 344 PANTHER CYCLIN-DEPENDENT KINASE A-2 51 341 - -
Bva13g01533 344 SUPERFAMILY Protein kinase-like (PK-like) 47 340 IPR011009 -
Bva13g01533 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Bva13g01533 344 CDD STKc_CDK1_CdkB_like 54 337 - -
Bva13g01533 344 Gene3D Phosphorylase Kinase; domain 1 51 134 - -
Bva13g01533 344 PANTHER CELL DIVISION PROTEIN KINASE 51 341 - -
Bva13g01533 344 Gene3D Transferase(Phosphotransferase) domain 1 136 342 - -
Bva13g01533 344 ProSiteProfiles Protein kinase domain profile. 54 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01533 344 Pfam Protein kinase domain 54 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01533 Bva-Chr13 8967244 8973125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01533 51 344 Core Cell Cycle Gene Families AT3G48750 86.054 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bva13g01533 Pkinase 6.2e-80 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01533 K02206 - gmx:100782865 575.474