Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01474 ATGCAATATCAAGAgatattttccttcatttttacATTACTAATCCTTCATCTTAATCTTTGTGCTCGCAATGCCCAAGCCCTAGATTGCAGAGGTCCTCCAAAAACCATTACAGTTAGTCAATCGGGGACAGCAAACTTCAAAACAGTTCAAAGTGCCGTTGAGTCTGTCCCTTCAGACAACTCTCAATGGATTCACATCAAGATTTCCCCAGGCATTATAGGAGCTGGAAGCAAATCCACCAGCATCGAATTTGATGGCCTGCCACCTTTTAATACTCCTACGTTTAGTACTTCTGGAGCAGATAACATAATCGTAGAGGGCATTACTTTCAAGAATACTCATAATGACCCAATCCAATTAGAAGCAAGCCCTATCCGCCCTGCTGAAGCAGCTAGAATAGAAGGAgataaaattgcaatttttgaTTGTTCATTTTTCGGGGTGCAAGATACCAGTGGTCGCCATTACTACCATAACTGCTACATTCAGGGAGCAATAGATTTCATATTTGGGAAAGGTCAGTCTATGTTTGAGGAAAGTATAATAGACTATTCAGTGGGGAAATATGGTCTCAAAGGCCTCGTTGGATTCCTAACTGCGCAGAAAAGGGAAGCAGCAAATGAAACCAATGGGTTTGTGTTCAAAAATTGTACCATAACTGGGAAAGGAAAGACATTCCTTGGGAGAGGATATGGAAATTTCTCCAGAGTCATCATAGCTGATTCATTAATGGAAGATGTTATTACACCCATGGGCTGGAATGCTTGGCGTGGCGCCCGCCATGAGTA 791 0.4058 MQYQEIFSFIFTLLILHLNLCARNAQALDCRGPPKTITVSQSGTANFKTVQSAVESVPSDNSQWIHIKISPGIIGAGSKSTSIEFDGLPPFNTPTFSTSGADNIIVEGITFKNTHNDPIQLEASPIRPAEAARIEGDKIAIFDCSFFGVQDTSGRHYYHNCYIQGAIDFIFGKGQSMFEESIIDYSVGKYGLKGLVGFLTAQKREAANETNGFVFKNCTITGKGKTFLGRGYGNFSRVIIADSLMEDVITPMGWNAWRGARHE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01474 263 ProSitePatterns Pectinesterase signature 2. 163 172 IPR033131 -
Bva13g01474 263 Gene3D - 33 263 IPR012334 -
Bva13g01474 263 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 263 - -
Bva13g01474 263 Pfam Pectinesterase 74 260 IPR000070 GO:0030599|GO:0042545
Bva13g01474 263 PANTHER PECTINESTERASE 5 263 - -
Bva13g01474 263 SUPERFAMILY Pectin lyase-like 33 259 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01474 Bva-Chr13 7863968 7866004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01474 35 263 Carbohydrate Esterase AT2G19150 44.177 6.06e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01474 - - aprc:113866618 254.218