Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01460 ATGgttattcaattttcagtttattatataatttttatactatGGCCAATGTCTTCATTGGCATCTGCACAATCCATCGTAGAAACCAAACCTGGTTGTGATGGAACTTGTGGAATTTCCATTCCTTATCCCTTTGGAATGAAAGATCCCAATTGCTATGCAGACAAGTGGTTCGAAATCGATTGCCGAAACGTTTCCGGCATCTTAAAACCCTTCCTGAAGTTCGCAGATATGGAGGTCACCTATTTCTCAGCTGCTGCAAACCTCATTGAGATTAACAATCCAATCAAGTGTTGGAACTGCAGGAACAAAACCACAGGAAACGCGGTAGACCTGCGAGGAAGCCCTTTCGTTTACTCACAAACACTAAACAAGTTTTATGCCATTGGATGCAATAGCCTTGTTCTTCTGAACTCAAATGGCACAAAAGTTGGTGGATGTGTCTCAGTTTGTGATGATAACAACGATGAAgccaactttgaaacaagCGATGGTTGCCATGGTAGGTATTGCTGTGAGACTTCACTGCCAAATTATCTCAAAGAATTTAACACAACAGTTGAAACCCTAGGGGataaccctaaccctaacaGTACTGTGACTGTGAGTGATGATCAGTGCAATTGTGCTCTGATTGTGTCTGAGGGGTTTCTTTTTCAACGTCCATACACTTATAATAGACTTGTTCATGATCTAACGTTTTCCGGTTATGCAAGTGCTTATCTTGAGTGGGAGATTACAGATTCTAGTTTGCAACTTCCAAACAGAAACAACTACTGCTATCAAACAAATTCAACatcttcaaataataaaagcacAGGTAGAAGATGTCGGTGCAATGATGGCTTTGGTGGAAATCCATACATATCTGGAGGATGTACAGGTACAAAGCTAGACTATATGTACGTatGTGTTTTCTCCAGCCTTGGGTCCATCCTTTTGCTCCTTGGTATATGGTGGTTGTATAAACttgcaaagaaaagaatgactGAGAAAAGGAAGGAGAAAAACTTCAAAGAAAATGGTGGATTGTTGTTGCAACAAAAACTAACTTCTGGTGAAGTCAATGTTGAGAAGACAAAACTGTTCAGTTTAAAGGACTTGGAGAAGGCAACAGATCGCTTTAATTTCACTGACAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTCATTGAACTCTTAACGGGACAAAAGCCAATATCTTCATTAAGACAAGAGGAAGCGAAAAGTTTAGCTTCCTATTTCATTATTTGCATGGAAGAAGATTGCCTTTTTGATATTGTTGATGATAGAGTAATGAAGGATGGAGAGAAAGAACATATCATGGAGGTTGCAGTCCTTGCAAAAAGATGCATAAATTTGAATGGGAAGAAACGGCCTACTATGAAAGAAGTAACAATAGAATTAGAAAGGATCCAAAATTTGGGAAAGAGGTCCAATTTGCATCAAAATCATGAAGAAATTGACTTTCCTGAAATTGAAGCCTATAAACCTTGGGTTGCAGATCCTACAAGTATGTCAATTGAGAACAGCACATCATCCTCCTCAACTGAGATTCTACCTATTGTATACTTTaaata 1580 0.3652 MVIQFSVYYIIFILWPMSSLASAQSIVETKPGCDGTCGISIPYPFGMKDPNCYADKWFEIDCRNVSGILKPFLKFADMEVTYFSAAANLIEINNPIKCWNCRNKTTGNAVDLRGSPFVYSQTLNKFYAIGCNSLVLLNSNGTKVGGCVSVCDDNNDEANFETSDGCHGRYCCETSLPNYLKEFNTTVETLGDNPNPNSTVTVSDDQCNCALIVSEGFLFQRPYTYNRLVHDLTFSGYASAYLEWEITDSSLQLPNRNNYCYQTNSTSSNNKSTGRRCRCNDGFGGNPYISGGCTGTKLDYMYVCVFSSLGSILLLLGIWWLYKLAKKRMTEKRKEKNFKENGGLLLQQKLTSGEVNVEKTKLFSLKDLEKATDRFNFTDKSDVYSFGVVLIELLTGQKPISSLRQEEAKSLASYFIICMEEDCLFDIVDDRVMKDGEKEHIMEVAVLAKRCINLNGKKRPTMKEVTIELERIQNLGKRSNLHQNHEEIDFPEIEAYKPWVADPTSMSIENSTSSSSTEILPIVYFK 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01460 526 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 376 IPR045274 GO:0007166
Bva13g01460 526 Gene3D Transferase(Phosphotransferase) domain 1 368 494 - -
Bva13g01460 526 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 377 519 - -
Bva13g01460 526 Pfam Protein tyrosine and serine/threonine kinase 374 467 IPR001245 GO:0004672|GO:0006468
Bva13g01460 526 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 377 519 IPR045274 GO:0007166
Bva13g01460 526 SUPERFAMILY Protein kinase-like (PK-like) 374 467 IPR011009 -
Bva13g01460 526 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 376 - -
Bva13g01460 526 Pfam Wall-associated receptor kinase galacturonan-binding 33 92 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01460 Bva-Chr13 7741660 7745949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01460 376 518 Receptor kinase-like Gene Family AT1G16260 45.139 1.77e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva13g01460 PK_Tyr_Ser-Thr 7.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01460 - - gmx:100798794 346.665