Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01453 ATGGCCTCTAAACATCAGCACATGATCAAGCTGCCTGTCCATTTCTTCAAGGTCATACTTACTCGAACCCTTTTGGAAGGAAAACTAATGATTCCAAGCACGTTTGTGAGGGaatatggagaagttttacCAAACACAGTATTTCTTAAGCTTCCTAATGGCGCAGAATGGGAAATCAATGTGGCAAAACGCGGTGATCAAGTTTGGTTTGAAAAGGGTTGGAAAGAATTTGCTGAGTCTCACTCTCTAGGCCATGGACATTTCTTGGTTTTTAGCTATGGAGGAACTTCTTGTTTTGAGGTACTCATTTTGGCCAAGTGTGGCTTGGAGATAGACTACcttttgaatgaaaaagagGGAAATGGGGTAGCCAAAGATCAAGAATTTTA 389 0.383 MASKHQHMIKLPVHFFKVILTRTLLEGKLMIPSTFVREYGEVLPNTVFLKLPNGAEWEINVAKRGDQVWFEKGWKEFAESHSLGHGHFLVFSYGGTSCFEVLILAKCGLEIDYLLNEKEGNGVAKDQEF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01453 129 ProSiteProfiles B3 DNA-binding domain profile. 14 107 IPR003340 GO:0003677
Bva13g01453 129 CDD B3_DNA 14 104 IPR003340 GO:0003677
Bva13g01453 129 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 124 - -
Bva13g01453 129 Gene3D - 10 107 IPR015300 -
Bva13g01453 129 PANTHER B3 DOMAIN-CONTAINING 12 124 - -
Bva13g01453 129 Pfam B3 DNA binding domain 15 103 IPR003340 GO:0003677
Bva13g01453 129 SMART B3_2 15 110 IPR003340 GO:0003677
Bva13g01453 129 SUPERFAMILY DNA-binding pseudobarrel domain 11 104 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01453 Bva-Chr13 7695621 7696776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01453 15 121 B3 DNA Binding Superfamily AT1G49475 45.794 1.10e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva13g01453 B3 2.1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01453 - - aprc:113849508 148.288