Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01424 ATGAATATCTTTAGCCTTTTGGTGTTGTTCttatctttcttctctgtCATGGGACAACTTCCTTCCCAGGACATTTTAGCATTGCTGGAATTCAAGAAAGGCATTAAGCATGACCCTAACGGTTTTATTCTCAGTTCCTGGAACGAGGAATCCATTGACTTTAATGGATGCCCATCTTCATGGAATGGAGTTCTCTGTAATGGTGGTAGTGTTGCTGGGGTTGTCCTTGATGACTTGGGTCTCTCTGCTGATGTAGACTTGAGTATATTTTCTAATCTCACAAAGCTTGCCAAGCTCTCAATGTCCAACAATTCCATATCCGGAAAACTTCCTGACAACATAGCTAACTTCAAAAGCCTTCAATTTTTGGATGTTTCTGATAATCTGTTTTCTTTGTCCTTGCCGTTGGGTATTGGTGAGTTAGCTAACTTGCAGAACCTTTCATTGGCCGGGAATAACTTCTCTGGTCCGATTCCTGAAACTATTTTGGGGATGACTTCAATCCAGTCCTTGGACTTGAGCCGGAATGGTTTTTCTGGTGCACTCCCAGTTGCATTGACTAAGCTGACTAGCCTGGTATctcttaatttatctcataATGGCTTCACTGGTAAAATTCCTAAAGGTTTTGAGTTGATGTCTACACTTGAAGTGCTTGACTTGCACCGAAATATGCTTGATGGTCAATTGgatgttgaattttttcttttttcaagtgCTACTCATGTTGATTTTAGTGAGAATATGCTAGTGAGCTCTAATTCCCAGCAGCAGAAGCTCTTACCAGAAATATCTGAAACtattaagtatttaaatctaAGCCACAACCAGCTCACTGGGTCATTGGTAAGTGGTGGTGGGCAACTAGTTTTCAAAGATTTGAAGGTTTTGGATTTCAGCTACAATCAATTGTCTGGAGAATTGCCTGGCTTTGAATTTGTTTATGAACTTCAGGTTCTTAAGATTAGTAACAACAGGTTTTCAGGATTTATTCCGAATGGCCTCCTCAAAGGGGATGCATCGCTCCTAATTGAACTGGATTTGAGCGCCAACAATTTATCAGgGCCAATAAGTATGATTACATCAACAACTCTCCGTTTTCTTAATCTCTCATCAAATGGATTCACTGGTGAGTTGCCGCTGCTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAACAACAAATTAGAAGGAAATTTATCCAGGGTGTTGAGGTGGGGGAACATTGAATTTATTGATCTAAGCAGGAACCATCTGACAGGACCTATCCCTGAGGTGACCCCTCAATTTTTGCGATTAAATTATCTGAGTCTCTCCCATAATTCTCTTAGCAGCTCTCTCCCAAGAGTTTTAACGCATTATCCAAAACTTAGAGTGCTTGATGTTAGTTCCAACCAATTAGATGGACTACTTCAAGCTGATCTGCTCATGGTACCCACTTTACAAGAGCTACATCTTGAAAACAATATGATCTCTGGTGGCATTAAATTATCTTCTTCCCCCGGTCAATCTGATCTTCAGGTTCTTGATCTTTCTCACAACCAGTTTAGTGGCTATTTTCCCGATGAATTTGGGTCATTAACTGGCCTGAAAGTGCTGAATATTGcaggaaataatttttctggTTCTCTTCCTACTGCCATTGCTGACATCAGTTCACTCAACTCCTTGGATATATCAAAGAATCATTTTACAGGTCCTTTACCAAATAACTTGCCAAAGGAGCTTGAAAACTTCAATGCTTCATATAATGATCTGTCTGGTGTTGTCCCAGAAAATCTTAGGAAGTTCCCCAGCTCATCTTTCTTTCCTGGAAATTCTAGACTACGCTTTCCAAATGGTCCTCCTGGATCAACCAATATGCCTGCTGAAAATTCCAAAAGGAGATCTATGAGCAATACTGTCAAAGTGATAATAATAGTGTCATGTGTGGTTGCTCTGTTCATATTAATTCTGCTTGCTGTCTTCATCAGTTATATACGTATATCAAGATCTTCTCCTCCCGAATATGCTACAAGTAAGAATAATCATGTTCGTGCTCAACCAAATGTCTCTGGTGTAGGGCGTACAACAGAAAGAGGTGGTGCTTTGGTTGTGTCAGCTGAGGATCTCGTGACCTCACGGAAAGGATCATCATCAGAGATAATCAGCCCTGATGAGAAAATGGCAGCTGTAACTGGTTTCTCCCCGTCAAAGAATAGCCACCTTTCATGGTCATCAGAGTCTGGTGATTCCTTCACTGCTGAAAGTCTTGCGAGATTAGATGTGAGAACACCAGATAAGTTGATTGGAGAGCTGCATTTCCTTGATGATTCAATAACACTGACACCTGAGGAGCTTTCAAGGGCCCCAGCTGAAGTTTTGGGAAGAAGTAGCCACGGCACTTCTTATAAAGCAACTCTTAATAATGGTTTATTATTGAGAGTGAAATGGTTGCGAGAAGGAGTGGCTAAACAGAGAAAAGAATTTACTAAAGAGGCTAAAAAATTTGCAAACATCAGGCACCCAAATATTGTGGGATTGAGAGGCTACTACTGGGGTCCAACACAACATGAGAAGCTTATTCTTTCAGATTACATCTCTCCTGGAAGTCTTGCTAGTTTCCTTTATGGTATTATTGATTATTCTTCACTATTTGAAGTTGCTCCTACTGCATTTAAATTCTCAGATCGACCGGGAAGAAAAGGTCCACCATTAACCTGGGACCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCTTGAACTATCTCCATTTTGATCGTGCTCTTCCTCATGGGAATCTTAAAGCAACTAATGTGTTGTTAGATTCTGCTGATCTGAATGCCCGCGTCGCAGATTACTGCCTCCACCGACTTATGACTCAGGCTGGTACCACTGAACAGATTCTTGATGCCGGGGTTTTGGGTTATCGCGCGCCAGAGCTGGCTTCTTCCAAGAAGCCAGTGCCCTCCTTCAAGTCAGATGTTTATGCTTTTGGAGTGATACTTTTGGAACTCTTAACTGGAAGGTGTGCAGGTGATGTGATCTCTGGAGAGGATGGAAATGTTGATTTGACAGATTGGGCGAAGGTGCGTGTGTCAGCAGGTCGAGGCTCGGAATGTTTTGATGCTGCATTGATGCCAGAGATGGGTAATGCCATGACAGAAAAGGCAATGAAGGATGTGCTTGGAATAGCTCTTAGATGCATTCGATCTGTTTCTGAGAGGCCAGGTATCAAGACTATATATGAAGATCTTTCATCTATATA 3251 0.4073 MNIFSLLVLFLSFFSVMGQLPSQDILALLEFKKGIKHDPNGFILSSWNEESIDFNGCPSSWNGVLCNGGSVAGVVLDDLGLSADVDLSIFSNLTKLAKLSMSNNSISGKLPDNIANFKSLQFLDVSDNLFSLSLPLGIGELANLQNLSLAGNNFSGPIPETILGMTSIQSLDLSRNGFSGALPVALTKLTSLVSLNLSHNGFTGKIPKGFELMSTLEVLDLHRNMLDGQLDVEFFLFSSATHVDFSENMLVSSNSQQQKLLPEISETIKYLNLSHNQLTGSLVSGGGQLVFKDLKVLDFSYNQLSGELPGFEFVYELQVLKISNNRFSGFIPNGLLKGDASLLIELDLSANNLSGPISMITSTTLRFLNLSSNGFTGELPLLTGSCAVLDLSNNKLEGNLSRVLRWGNIEFIDLSRNHLTGPIPEVTPQFLRLNYLSLSHNSLSSSLPRVLTHYPKLRVLDVSSNQLDGLLQADLLMVPTLQELHLENNMISGGIKLSSSPGQSDLQVLDLSHNQFSGYFPDEFGSLTGLKVLNIAGNNFSGSLPTAIADISSLNSLDISKNHFTGPLPNNLPKELENFNASYNDLSGVVPENLRKFPSSSFFPGNSRLRFPNGPPGSTNMPAENSKRRSMSNTVKVIIIVSCVVALFILILLAVFISYIRISRSSPPEYATSKNNHVRAQPNVSGVGRTTERGGALVVSAEDLVTSRKGSSSEIISPDEKMAAVTGFSPSKNSHLSWSSESGDSFTAESLARLDVRTPDKLIGELHFLDDSITLTPEELSRAPAEVLGRSSHGTSYKATLNNGLLLRVKWLREGVAKQRKEFTKEAKKFANIRHPNIVGLRGYYWGPTQHEKLILSDYISPGSLASFLYGIIDYSSLFEVAPTAFKFSDRPGRKGPPLTWDQRLKIAVDVARGLNYLHFDRALPHGNLKATNVLLDSADLNARVADYCLHRLMTQAGTTEQILDAGVLGYRAPELASSKKPVPSFKSDVYAFGVILLELLTGRCAGDVISGEDGNVDLTDWAKVRVSAGRGSECFDAALMPEMGNAMTEKAMKDVLGIALRCIRSVSERPGIKTIYEDLSSI 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01424 1083 Gene3D Ribonuclease Inhibitor 186 255 IPR032675 -
Bva13g01424 1083 Gene3D Transferase(Phosphotransferase) domain 1 887 1083 - -
Bva13g01424 1083 SUPERFAMILY Protein kinase-like (PK-like) 785 1080 IPR011009 -
Bva13g01424 1083 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Bva13g01424 1083 SUPERFAMILY RNI-like 98 586 - -
Bva13g01424 1083 PANTHER OS07G0626500 PROTEIN 5 1083 - -
Bva13g01424 1083 PANTHER - 5 1083 - -
Bva13g01424 1083 Gene3D Ribonuclease Inhibitor 256 620 IPR032675 -
Bva13g01424 1083 MobiDBLite consensus disorder prediction 608 627 - -
Bva13g01424 1083 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Bva13g01424 1083 Pfam Protein tyrosine and serine/threonine kinase 786 1003 IPR001245 GO:0004672|GO:0006468
Bva13g01424 1083 Gene3D Phosphorylase Kinase; domain 1 774 859 - -
Bva13g01424 1083 SMART LRR_typ_2 314 338 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 504 526 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 189 212 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 430 453 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 527 550 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 93 116 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 454 477 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 165 188 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 213 237 IPR003591 -
Bva13g01424 1083 SMART LRR_typ_2 117 141 IPR003591 -
Bva13g01424 1083 ProSiteProfiles Protein kinase domain profile. 782 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01424 1083 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Bva13g01424 1083 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Bva13g01424 1083 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Bva13g01424 1083 Pfam Leucine Rich repeat 267 280 IPR001611 GO:0005515
Bva13g01424 1083 Pfam Leucine Rich repeat 362 378 IPR001611 GO:0005515
Bva13g01424 1083 SUPERFAMILY L domain-like 253 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01424 Bva-Chr13 7483091 7488072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01424 6 1071 Receptor kinase-like Gene Family AT1G55610 27.547 3.96e-75 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva13g01424 PK_Tyr_Ser-Thr 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01424 - - gmx:100793639 1684.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01424 13 7483091 7488072 Bva13g01424 13 7483091 7488072 ECH